Pyxidicoccus parkwayensis: JY651_16880
Help
Entry
JY651_16880 CDS
T09992
Symbol
mdh
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak00020
Citrate cycle (TCA cycle)
ppak00270
Cysteine and methionine metabolism
ppak00620
Pyruvate metabolism
ppak00630
Glyoxylate and dicarboxylate metabolism
ppak00680
Methane metabolism
ppak00710
Carbon fixation by Calvin cycle
ppak00720
Other carbon fixation pathways
ppak01100
Metabolic pathways
ppak01110
Biosynthesis of secondary metabolites
ppak01120
Microbial metabolism in diverse environments
ppak01200
Carbon metabolism
Module
ppak_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppak_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppak_M00012
Glyoxylate cycle
ppak_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JY651_16880 (mdh)
00620 Pyruvate metabolism
JY651_16880 (mdh)
00630 Glyoxylate and dicarboxylate metabolism
JY651_16880 (mdh)
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
JY651_16880 (mdh)
00720 Other carbon fixation pathways
JY651_16880 (mdh)
00680 Methane metabolism
JY651_16880 (mdh)
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
JY651_16880 (mdh)
Enzymes [BR:
ppak01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
JY651_16880 (mdh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldh_1_N
Ldh_1_C
Glyco_hydro_4
UDPG_MGDP_dh_N
Porphobil_deam
RS_preATP-grasp-like
Motif
Other DBs
NCBI-ProteinID:
QSQ26498
LinkDB
All DBs
Position
complement(4524138..4525082)
Genome browser
AA seq
314 aa
AA seq
DB search
MAQNRKKKIGLIGGGQIGGNLALLAIQKQLGDVVLYDIPAAEGMVKGKALDINQLSAVDG
YSCRVTGTTDWKDVAGSDVIIITAGVPRKPGMSREDLLDINLKIMKDVAANIKQHAPNAF
VINVANPLDAMVFALHKIAELPKNMVAGMAGVLDTSRFKCFVAEELGCSIRDVEALVLGG
HGDDMVPLVRHSTVGGVPLTQLIAKDRLDAIIKRTREGGAELVALYKTGSAYFAPAASSI
AMAESFLFDRKRVLPAAALLEGQYGINGYFFGAPVQIGAGGVEKVITVELDGDEKAQLEK
SFQSVKKTVDSVKL
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaatcgcaagaagaagattggcctcatcggcggcggccagattggcggcaat
ctggcgctgctcgccatccagaagcagctgggtgacgtggtgctctacgacatccccgcg
gccgagggcatggtcaagggcaaggcgctggacatcaaccagctctccgcggtggacggc
tattcctgccgcgtcaccggcaccacggactggaaggacgtggccggctcggacgtcatc
atcatcaccgccggcgtgccgcggaagccgggcatgtcccgtgaggacctgctcgacatc
aacctgaagatcatgaaggacgtggcggccaacatcaagcagcacgcccccaacgccttc
gtcatcaacgtggccaacccgctggacgcgatggtgttcgcgctccacaagatcgccgag
ctgccgaagaacatggtggcgggcatggcgggcgtgctggacaccagccgcttcaagtgc
ttcgtggccgaggagctgggctgctccatccgcgacgtggaggcgctggtgctcggcggc
cacggcgacgacatggtcccgctggtgcgccacagcaccgtgggcggcgtgcccctgacg
cagctcatcgccaaggaccggctggacgccatcatcaagcgcacccgcgagggcggcgcg
gagctggtggccctgtacaagacgggcagcgcgtacttcgccccggccgcgtcctccatc
gccatggcggagagcttcctcttcgaccgcaagcgcgtgctgccggccgcggccctgctg
gagggccagtacggcatcaacggctacttcttcggcgccccggtgcagatcggcgcgggc
ggcgtggagaaggtcatcaccgtggagctcgacggtgacgagaaggcccagctcgagaag
tccttccagtcggtgaagaagacggtcgactccgtcaagctgtag
DBGET
integrated database retrieval system