Pyxidicoccus parkwayensis: JY651_21905
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Entry
JY651_21905 CDS
T09992
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ppak
Pyxidicoccus parkwayensis
Pathway
ppak01501
beta-Lactam resistance
ppak01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppak00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JY651_21905
01503 Cationic antimicrobial peptide (CAMP) resistance
JY651_21905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppak03036
]
JY651_21905
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppak02000
]
JY651_21905
01504 Antimicrobial resistance genes [BR:
ppak01504
]
JY651_21905
Chromosome and associated proteins [BR:
ppak03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
JY651_21905
Transporters [BR:
ppak02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
JY651_21905
Antimicrobial resistance genes [BR:
ppak01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JY651_21905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
BSH_CzcB
Biotin_lipoyl
BSH_YknX
RND-MFP_C
Beta-barrel_RND_2
BSH_CusB
NQRA_N
RnfC_N
CzcB_C
Peptidase_M23
PYNP_C
OB_ChsH2_C
BSH_YhbJ
PTS_EIIA_1
Motif
Other DBs
NCBI-ProteinID:
QSQ27402
UniProt:
A0ABX7PAG1
LinkDB
All DBs
Position
5817046..5818200
Genome browser
AA seq
384 aa
AA seq
DB search
MSRRSGRRQGRLPRGRSRTTVIRRMWMAAVLATVVMTGCAKGHDKPGLPAEQGPAAMGVK
AITPATELGANVTRVTGQVRSKQEATLSAQATGTLAKMNVKVGDKVKKGQTLAVLDTSNV
SIGVEQARAVKQAADAALQLATSSLERARKVAEGGGMAAAALDQAEIGQKQAAAQAAQAA
AAVKMAEENLRDMAIIAPFDGIITARMKNIGDTVAMMPPTPVFSLVDITGLEVRALVPES
VVDKVKAGSKTSGTVSPSGMRFDVQVTTVGAVVDTTNRTVEVLADVVGETATPLRPGSLV
ELDFSSVGQADDKGLFLPAQAVSAKGQEGFVWVVQDGTVRKRDVRVERVLPGYVRVLQGL
GADERVLADSSLDVKEGTAVRVVQ
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacgcagcgggcgccggcaggggcgtttaccgcgcggcaggagcaggacgacc
gtgattcgacgcatgtggatggccgcggtactggcgacggtggtgatgacggggtgcgcc
aagggccatgacaagcccggccttccggctgagcagggccccgcggcgatgggtgtgaag
gcgattacccccgccacggagctgggcgccaacgtcactcgcgtgacgggtcaggtccgc
tccaagcaggaggccacgctgagcgcgcaggccaccggcaccctcgcgaagatgaacgtg
aaggtgggcgacaaggtgaagaagggccagacgctggcggtcctcgacacctccaacgtc
tccatcggcgtggagcaggcacgcgcggtaaagcaggcggcggacgccgcgttgcagctc
gccacctccagcctggagcgcgcgcgcaaggtggccgagggcggcggcatggccgcggcg
gccctggaccaggcggaaatcggccagaagcaggcggccgcccaggcggcccaggccgcc
gccgcggtgaagatggcggaggagaacctgcgcgacatggccatcatcgcgcccttcgac
ggcatcatcaccgcgcgcatgaagaacatcggcgacacggtggcgatgatgccgcccacg
cccgtgttctccctggtggacatcacgggcctggaggtccgcgcgctcgtccccgagtcc
gtggtggacaaggtgaaggcgggcagcaagacgtccggcaccgtgagccccagcggcatg
cgcttcgacgtgcaggtgaccacggtgggcgcggtggtggacaccaccaaccgcaccgtg
gaggtgctggcggacgtggtgggcgagacggccacgccgctgcgccccggctcgctggtg
gagctggacttctcgtccgtgggccaggccgacgacaagggcctcttcctccccgcccag
gccgtcagcgccaagggccaggagggcttcgtgtgggtggtgcaggacggcacggtgcgc
aagcgcgacgtgcgcgtcgagcgcgtgctgcccggttacgtccgtgtcctccagggcctg
ggcgccgacgagcgcgtgctcgccgactcctccctggacgtgaaggagggcacggccgtc
cgcgtggtgcagtga
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