Pteronotus mesoamericanus (Parnell's mustached bat): 129071160
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Entry
129071160 CDS
T09558
Symbol
LIG4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
129071160 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppam03400
]
129071160 (LIG4)
Enzymes [BR:
ppam01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
129071160 (LIG4)
DNA repair and recombination proteins [BR:
ppam03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
129071160 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
DNA_ligase_A_C
BRCT_2
RNA_ligase
mRNA_cap_enzyme
LIG3_BRCT
Motif
Other DBs
NCBI-GeneID:
129071160
NCBI-ProteinID:
XP_054430287
LinkDB
All DBs
Position
Unknown
AA seq
914 aa
AA seq
DB search
MAASQTSQTSQTVASHVPFADLCSTLERIQRSKGRVDKIRYLREFLDSWRKFHDALHKNQ
KDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPREGKDALKLLNYRTPTG
THGDAGDFAMIAYFVLKPRCLQKGQLTIQQVNDILDSIASNNSARRKDLVKKSFLHLISK
CSALEQKWLIRMIVKDLKLGVSQQTVFSIFHNDAAELHNVTTDLEKVCRQLHDPSVGLSD
ISITLFSPFKPMLAAIADIERIEKDMKNQNFYIETKLDGERMQMHKDGDVYEYFSRNGYK
YTEQFGASPHEGSLTPFIHKAFKTDIQICILDGEMMAYNPNTQTFMQKGNKFDIKRMVEY
SELQTCYCVFDVLMVNNKKLGHETLRKRYEILSSIFTPIPGRIEVVQKTEAHTNKEVIEA
LNEAIDKREEGIMIKHPLSIYKPDKRGEGWLKIKPEYVTGLMDELDIIIVGGYWGKGSRG
GMMSHFLCAVAEKPPSREKPSVFHTLCRVGSGYTMKELYDLGLKLAKHWKPFHKKAPPSN
ILCGTEKPEVYIEPCNSVIVQIKATEIVPSDMYKTGCTLRFPRIEKIREDKEWHECMTLD
DLEQLRGKASGKLASKHFCVSSNDGPQEKKRKAAPKMKKVIGIIEHLKAPNLSNINKVSN
IFEDVEFCVMSGINSHPKTDLENRIAEFGGYIVQNPGPDTYCIIAGSENIRVKNIISSNK
HDVVKPEWLLECFKTKSCVPWKPCFMIHMCPSTKEHFAHEYDCYGDSYFADTDLNQLKEV
FTGIKSPGEQTTEEMASVIADLEYRYLGDYSPLSMFRHLTIYLDLYTVINDLSSRIEGTR
LAFTALELQFHGAKVVSYLAEGVSYVIVGEDHSRVADFKAFRRTLKRKFKILQEGWVTDS
IDKCELQEENEYLV
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atggctgcctcacaaacctcacaaacctcacaaactgttgcatcccacgttccttttgca
gatttgtgttcaactttagaacgaatacagagaagtaaaggacgtgtagataaaatcaga
tacttgagggaatttttagattcttggaggaaatttcatgatgcccttcataagaaccaa
aaagatgtcacagactctttttatccagcaatgagacttattcttcctcagctagaaaga
gagagaatggcctatgggatcaaagaaactatgcttgctaagctttatattgaattgctc
aatttacctagagaaggaaaagatgctcttaaacttttaaattacagaacacctactgga
actcatggagatgctggagactttgcaatgattgcatactttgtgttaaaaccaagatgt
ttacagaaaggacaattaaccatacagcaagtaaacgacattttagactcaattgccagc
aataattctgccagaagaaaggacctagtaaagaagagttttcttcaccttataagtaag
tgttcagcacttgaacaaaagtggcttatacgaatgattgtaaaggacttaaagcttggt
gttagtcagcaaaccgtgttttctatttttcataatgatgctgctgagttgcacaatgtc
accacagatctagaaaaagtttgcaggcaactgcatgatccttcagtaggactcagtgat
atttctatcactttattctctccctttaaaccaatgctagctgcaatagcagatattgag
cgaattgagaaggacatgaaaaaccagaatttctacattgaaaccaagctagatggtgag
cgtatgcaaatgcacaaagatggtgatgtatatgaatacttctcacggaatgggtataaa
tatacagaacagtttggtgcttctccacatgagggttctctcacaccattcattcataag
gcattcaaaacagatatacaaatttgtatcctggatggtgagatgatggcctacaatcct
aatacccaaacttttatgcaaaaggggaataagtttgatattaaaagaatggtagaatat
tcagagctgcagacttgttattgtgtttttgacgtcttgatggtcaataataaaaagcta
ggacatgaaaccctgagaaagaggtatgaaattcttagtagtatttttacaccaatacca
ggtagaatagaagtagtgcaaaagacagaagctcatactaataaagaagtaattgaggct
ctgaatgaagcaatagataaaagagaagagggaatcatgataaaacatcctctatccatt
tataagccagacaaaagaggtgaaggatggttaaaaattaagccagagtatgtaactgga
ctgatggatgaactggacatcataattgttgggggctactggggtaaaggttcgcgtggt
ggaatgatgtctcattttttgtgtgctgtagcagagaagcccccttctcgtgaaaaacca
tcagtatttcatactctttgtcgtgttggctcaggttataccatgaaagaactgtatgat
ctgggtttgaaattggccaaacactggaaaccttttcataaaaaagctccaccaagtaac
attttatgtggaacggagaaaccagaagtgtacattgaaccttgtaattctgtcattgtt
cagattaaagcgacagagattgttcccagtgatatgtataaaacaggctgcactttgcgt
tttccacgaattgagaagataagagaagacaaagagtggcatgaatgcatgactctggat
gacttagaacaacttcgagggaaagcatctggaaagcttgcatctaaacacttttgtgtc
agtagtaatgatggaccacaagaaaaaaaacggaaagctgccccaaagatgaagaaagtt
attggaattatcgagcacttaaaagcacctaacctttctaacataaacaaagtttccaat
atatttgaagatgtggagttttgtgttatgagtggaataaatagccatccaaagactgat
ctggagaacagaattgcagaatttggtggttatatagtacaaaacccaggcccagatacc
tactgcattattgcagggtctgagaacataagagtgaaaaacataatttcttcaaataaa
catgatgttgtcaagcctgagtggctgttagaatgttttaagaccaaaagctgtgtgcca
tggaagccttgctttatgattcatatgtgcccatcaacaaaagaacattttgcccatgaa
tatgattgttatggtgatagttattttgctgatacagatttgaaccaactgaaggaagta
ttcacaggaattaaaagtcctggtgaacagactactgaagaaatggcttctgtgattgct
gatttagaatatcgatacttaggggactactctcccctcagtatgtttcgacacctcact
atttatttggacttgtatactgttattaatgacctgagtagcagaatcgagggaacaaga
ttagcttttacagccttagagcttcaatttcatggagcaaaagtagtttcttatttagct
gagggagtatcttatgtaatcgttggggaggatcatagtcgtgtagcagacttcaaagct
tttcgaagaacccttaagagaaagtttaaaattctgcaagaaggttgggtaactgattca
atagacaaatgtgagttacaggaggaaaatgagtatttggtttaa
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