Pteronotus mesoamericanus (Parnell's mustached bat): 129086638
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Entry
129086638 CDS
T09558
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129086638 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppam03041
]
129086638 (EFTUD2)
Spliceosome [BR:
ppam03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
129086638 (EFTUD2)
Complex C
U5 SnRNP specific factors
129086638 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
129086638
NCBI-ProteinID:
XP_054449260
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDEDDEDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWVSVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacttgtatgatgagtttgggaattatattggaccagagctagattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgagatggatgatgaggat
gacgaggacgacgtcggcgaccatgacgaggatcaccccgggatggaggtggtgctgcac
gaggacaagaagtactaccccacagccgaagaggtgtacggtcccgaggtggagaccatc
gtccaggaggaagacactcagcctctcacagagcctattattaagccagtgaaaaccaag
aaattcactctgatggagcagacattacctgtcacggtgtatgagatggactttttggca
gacctgatggataactcagagctcatcagaaatgtgacgctttgcggccatctccatcac
ggcaagacgtgttttgtggattgtttaatagagcagactcacccggaaatcagaaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagagcaggagaggggcgttggc
atcaagagcactccggtgacagtggttttgccagataccaaaggaaaatcttacctcttc
aacataatggacaccccgggacatgtgaatttttctgatgaggtcacggctggcttgcgc
atctcggatggagtggtccttttcatcgatgctgctgagggcgtgatgctgaacacagag
cggctgatcaagcacgcggtgcaggagaggctggcggtcaccgtgtgcatcaacaagatc
gaccggctgatcctggagctgaagctgcctccgactgatgcttattacaagctgcgtcac
attgtagatgaggtcaatggattaataagcatgtactccactgacgagaacctgatcctg
tccccgctcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactg
ggctcctttgccaagatctacgcagacacgttcggtgacattaactaccaggaatttgct
aaaagactctggggtgacatctactttaaccccaagacgcggaagtttaccaaaaaggct
ccaactagcagctcccagaggagcttcgtagagttcatcttggagccgctttataagata
cttgctcaggttgtgggtgatgtggacaccagcctcccaaggaccctggatgagcttggc
atccacctgaccaaggaggagctgaagctgaacatccgtcccctgctccggctggtctgc
aaaaagttctttggcgaattcacaggctttgtggacatgtgcgtgcagcatatcccttcc
ccaaaggtgggcgccaagcccaagatcgagcacacctacaccggcggcgtggactccgac
ctcggcgaggccatgagcgactgtgaccctgatggccccctgatgtgccacacgaccaag
atgtacagcacagatgacggcgttcagtttcatgcgttcggccgggtgctgagcggcacc
atccacgctgggcagcctgtgaaggtgctgggggagaactacaccctggaggacgaggag
gactcccagatctgcaccgtgggccgcctctgggtctccgtggccaggtaccacattgag
gtgaaccgagttcctgctggcaactgggttctgattgaaggtgtcgatcaaccaattgtg
aagacggcgaccataactgagccccgaggcaatgaggaggctcagattttccgacccttg
aagttcaacaccacgtctgttatcaagattgctgtggagccagtcaacccctcagagctg
cccaagatgctggacggtctgcgcaaggtcaacaagagctacccgtccctcaccaccaag
gtggaagagtcgggcgagcacgtgattctggggactggggagctctacctggactgtgtg
atgcatgacctgcggaagatgtactccgagatagacatcaaggttgctgatcctgttgtt
accttttgtgagacagtggtagaaacatcctccctcaagtgctttgctgaaacacccaat
aagaaaaacaagatcaccatgatcgccgagcccctggagaagggcctcgccgaggacatt
gagaacgaggtggtccagatcacctggaacaggaagaagctgggagagttcttccagacc
aagtacgactgggatctgctggctgcccgttccatctgggcttttggccctgatgccact
ggccccaacatcctggtggatgacactctgccctctgaggtggacaaggctcttcttggc
tcagtgaaggacagcattgtgcagggtttccagtggggaaccagggaagggcccctctgt
gacgagttgattcgaaatgtcaagtttaagatcctagatgcagtggttgcccaggagcca
ctgcaccggggcgggggccagatcatccccacggccaggagggttgtctactctgccttc
ctcatggcaacgcctcgcctgatggagccttactactttgtagaggtccaggcccccgca
gattgtgtctccgctgtgtacaccgtcctggccaggcgcagggggcacgtgactcaggac
gcgcccatcccaggctcccctctctacaccatcaaagctttcatcccagctattgactct
tttggctttgagacggatctgcggactcacacccagggccaggccttctccttgtctgtc
tttcaccattggcagattgttcccggtgaccctctggataagagcattgtcattcgcccg
ttggagccacagccagctcctcacctggcccgagaattcatgatcaaaacccgtcgtagg
aagggcctgagcgaagacgtgagcatcagcaagttcttcgacgaccctatgttgctggag
ctcgccaagcaggatgttgtgctcaattaccccatgtga
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