Pteronotus mesoamericanus (Parnell's mustached bat): 129087353
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Entry
129087353 CDS
T09558
Symbol
KDM2B
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
ppam
Pteronotus mesoamericanus (Parnell's mustached bat)
Pathway
ppam03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppam00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
129087353 (KDM2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppam03000
]
129087353 (KDM2B)
04121 Ubiquitin system [BR:
ppam04121
]
129087353 (KDM2B)
03036 Chromosome and associated proteins [BR:
ppam03036
]
129087353 (KDM2B)
Enzymes [BR:
ppam01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
129087353 (KDM2B)
Transcription factors [BR:
ppam03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
129087353 (KDM2B)
Ubiquitin system [BR:
ppam04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
129087353 (KDM2B)
Chromosome and associated proteins [BR:
ppam03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
129087353 (KDM2B)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
129087353 (KDM2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
JHD
Cupin_8
JmjC
AppA_SCHIC
Motif
Other DBs
NCBI-GeneID:
129087353
NCBI-ProteinID:
XP_054450196
LinkDB
All DBs
Position
Unknown
AA seq
1324 aa
AA seq
DB search
MRQLLRPIDRQRYDENEDLSDVEEIVSVRGFSLEEKLRSQLYQGDFVHAMEGKDFNYEYV
QREALRVPLVFPEKDGLGIKMPDPDFTVRDVKLLVGSRRLVDVMDVNTQKGTEMSMSQFV
RYYETPEAQREKLYNVISLEFSHTKLEHLVKRPTVVDLVDWVDNMWPQHLKEKQMEATNA
IAEMKYPKVKKYCLMSVKGCFTDFHIDFGGTSVWYHVFRGGKIFWLIPPTLHNLALYEEW
VLSGKQSDIFLGDRVERCQRIELKQGYTFFIPSGWIHAVYTPVDSLVFGGNILHSFNVPM
QLRIYEIEDRTRVQPKFRYPFYYEMCWYVLERYVYCVTQRSYLTREYQRESMLIDAPRKP
SVDGFSSDSWLEMEEESCEQQPQEEEKEEEEEEEEEEGADKVPKPSADGPASPTSSPSED
QEPPGKKPKAPALRFLKRTLSNESEDSVKSTTMPTEYPKTPTGSPTTEGSAKWTHLTEFE
LKGLKALVEKLESLPENKKCVPEGIEDPQALLEGVKAALGCDSSQTSPVFIDLHRFENVL
KEHADDDPSLAITGVPVVTWPKKTPKNRAIGRPKVKLGPASAVKLAANRTTAGARRRRTR
CRKCEACLRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKED
TVEEEEGKFNLMLMECSICNEIIHPGCLKIKESEGVVNDELPNCWECPKCNHAGKTGKQK
RGPGFKYASNLPGSLLKEQKMNRDNKEGQESAKRRSECEEAPRRRSDEHPKKVPPDGILR
RKSDDVHLRRKRKYEKPQEPSARKRASTLQTSPGSSSHLSPRPPLGSSLSPWWRSSLTYF
QQQLKPGKEDKLFRKKRRSWKNAEDRMALVNKPLRRFKQEPEDGLPEAPPKTRESDHSRS
SSPTAGPSTESAEGPEEKKKVKMRRKRRLPNKELSKELSKELNQEIQKTESSLANENHQP
IKSEPESENEEPKRPLSLCERPHRFSKGLNGTPRELRHQLGPGLRSPPRVISRPPPSVSP
PKCIQMERHVIRPPPISPPPDSLPLDDGAAHVMHREVWMAVFSYLSHQDLCVCMRVCRTW
NRWCCDKRLWTRIDLNHCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLR
DLVLSGCSWIAVSALCSSSCPLLRTLDVQWVEGLKDAQMRDLLSPPTDNRPGQMDNRSKL
RNIVELRLAGLDITDASLRLIIRHMPLLSKLHLSYCNHVTDQSINLLTAVGTTTRDSLTE
INLSDCNKVTDQCLSFFKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFGQVEEKLL
QKLS
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagctgctgcgcccgattgaccgccagagatacgacgagaacgaggacttgtcg
gacgtggaggagatcgttagtgtccgcggcttcagcctggaggagaagctgcgcagccag
ctgtaccagggggacttcgtacacgccatggagggcaaagatttcaactatgagtatgtg
cagagagaagctctcagggttcccctggtatttccagagaaggatggactgggaattaag
atgcctgaccctgacttcacggtccgggacgtcaagctcctagtgggtagccggcggctg
gtggacgtgatggatgtgaacacacagaagggcacagagatgagcatgtcccagtttgtg
cgatactacgagacgccagaggctcagcgggagaagctgtacaacgtgatcagcctggag
ttcagccacaccaagctggagcacttggtcaagcgtccgactgtggtagacctggtggac
tgggtggacaacatgtggccccagcacttgaaggagaagcagatggaagccacaaacgcc
attgcagagatgaagtacccgaaagtgaagaagtactgtctgatgagcgtgaagggttgt
ttcactgacttccacatcgactttggaggcacttctgtttggtaccatgttttccggggt
gggaagatcttttggctgattccgccaaccctgcacaacttggcgctgtacgaggagtgg
gtgctgtcaggcaaacagagtgacatcttcctgggagaccgcgtggagcgctgccaaaga
attgagctgaaacagggctacacgtttttcatcccttccggctggatccatgccgtctac
acgccggtagactctctggtattcggcggaaacatcctacacagctttaacgtgcccatg
cagctgcggatctatgagatcgaggatagaacacgggtgcagcccaaattccgttacccc
ttctactatgagatgtgctggtatgtcttggagagatacgtgtactgtgtgacccagcgg
tcctacctcactcgggaataccagagagaatcaatgctgattgatgccccaagaaagccc
agtgtagacggcttctcatcggattcctggctggagatggaggaggagtcttgtgagcag
cagccccaagaggaggagaaggaggaagaggaggaggaggaggaagaagagggtgcagac
aaagtgcccaagccatctgccgacggccctgcctcgcccaccagctccccctcggaagac
caggagccccctggaaagaagcccaaagcgcctgcgctgcggttcctgaaaaggactttg
tcgaacgagtcagaggacagtgtgaagtccacgacaatgcccacagagtaccccaagacg
cccacgggctcccccaccaccgagggctctgccaaatggacccacctcaccgagttcgaa
ctgaagggcctgaaagccctggtggagaaacttgaatccctcccggagaacaagaagtgt
gtccccgagggcatcgaggaccctcaggcgctcctggagggcgtgaaggctgctctcggc
tgtgacagctctcagacttcccctgtttttattgaccttcacagatttgagaatgtcctg
aaggagcacgcagatgacgaccccagtctggccatcaccggggtccctgtagtcacttgg
ccaaagaagactccaaagaaccgggccatagggcggcccaaggtgaagctgggccccgcc
tccgcggtgaagttggccgccaaccggaccacggcgggagctcgccggcgccggacgcga
tgccgcaagtgcgaggcctgcctgcggaccgagtgcggagagtgccacttctgcaaggac
atgaagaagttcgggggccccgggcggatgaagcagagctgcatcatgcggcagtgcatc
gcgccagtgctgccccacacggctgtgtgcctggtgtgtggcgaggcggggaaggaagac
acggtggaagaggaggaaggcaagtttaacctcatgctcatggagtgctccatctgcaac
gaaatcatccaccctggatgccttaagattaaggagtcggagggcgtggtgaacgacgag
cttcccaactgctgggagtgtccaaagtgtaaccacgccggcaagaccgggaaacaaaag
cgtggccctggctttaagtacgcctccaacctgcccggctccctgctcaaggagcagaag
atgaaccgcgacaacaaggaaggccaggagtccgccaagcgcaggagcgagtgcgaggag
gcgccgcggcgcaggtccgacgagcaccccaagaaagtgcccccggacggcattctgcgc
agaaagtcagatgacgtgcacctgaggaggaagcggaaatacgagaagccccaggagccg
agtgcacgcaagcgagcctcgacgctgcaaacgtcccccggctcctcttctcacctctcg
ccgcgccccccgctgggcagcagcctcagcccctggtggagatccagtctcacttacttc
cagcagcagctaaaaccaggcaaggaagataagcttttcaggaaaaagcggcggtcctgg
aagaatgccgaggaccggatggctctagtcaacaagccactgcggcgcttcaagcaggag
ccagaggacggtctgcccgaggcgccccccaagaccagggagagcgaccactcccgctcc
agctcgccaacagccgggcccagcaccgagagtgcagaggggcccgaggagaagaagaag
gtgaagatgcgccggaaacggcggctccccaacaaggagctgagcaaggagctgagcaag
gagctcaaccaggagatccagaagacagagagcagcctggccaacgagaaccaccagccc
atcaagtcggagcctgagagtgagaacgaggagcccaagaggcccctgagcctctgcgag
cgcccccaccgcttcagcaaggggctcaacggcaccccccgggagctgcggcaccagctg
gggcccggccttcgcagcccaccccgcgtcatctcccggccccctccctccgtgtccccg
cccaagtgtatccagatggagcgacacgtgatccggccgccgcccatcagccccccaccc
gactcgctgcccctagatgatggggcggcccatgtcatgcaccgggaggtgtggatggcc
gtcttcagctacctcagccaccaagacctgtgtgtctgcatgcgggtctgcaggacctgg
aaccgctggtgctgcgataagcggttatggacccgcatcgacctgaaccactgcaagtcc
atcacgcccctgatgctgagcggcatcatccggcgacagcctgtctccctggacctcagc
tggaccaatatctccaagaaacagctgagctggctcatcaaccggttgcctgggctccga
gacttggtgctgtcgggctgctcatggatcgcggtctcagccctctgtagctccagttgt
ccattgctccggacactggatgtccagtgggtagaagggctcaaggatgcccagatgcgg
gatctcctgtccccgcccacggataacaggccaggtcagatggacaatcggagcaaactc
cgcaacatcgtggagctgcgtctggcaggcctggacatcacggacgcctccttgcggctc
atcatccgccacatgcccctgctctccaagctccacctcagttactgtaaccacgtgact
gaccagtccatcaacctgctcactgctgtgggcaccaccacccgagactccttaaccgaa
atcaacctgtcagactgcaataaggttactgaccagtgcctgtccttcttcaaacgctgt
ggaaatatctgtcatattgacctgaggtactgcaagcaagtcaccaaggaaggctgcgag
cagttcatagctgagatgtctgtgagtgtccagttcgggcaagtggaagaaaaactcctg
cagaaactgagttag
DBGET
integrated database retrieval system
