Pseudomonas phytophila: K3169_01930 Help Entry K3169_01930       CDS       T09747                                  Symbol ligB Name (GenBank) NAD-dependent DNA ligase LigB   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism ppao  Pseudomonas phytophila Pathway ppao03030   DNA replication ppao03410   Base excision repair ppao03420   Nucleotide excision repair ppao03430   Mismatch repair Brite KEGG Orthology (KO) [BR:ppao00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     K3169_01930 (ligB)    03410 Base excision repair     K3169_01930 (ligB)    03420 Nucleotide excision repair     K3169_01930 (ligB)    03430 Mismatch repair     K3169_01930 (ligB)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:ppao03032]     K3169_01930 (ligB)    03400 DNA repair and recombination proteins [BR:ppao03400]     K3169_01930 (ligB) Enzymes [BR:ppao01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      K3169_01930 (ligB) DNA replication proteins [BR:ppao03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      K3169_01930 (ligB) DNA repair and recombination proteins [BR:ppao03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      K3169_01930 (ligB)    NER (nucleotide excision repair)     GGR (global genome repair) factors      K3169_01930 (ligB)    MMR (mismatch excision repair)     DNA ligase      K3169_01930 (ligB)   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       K3169_01930 (ligB) BRITE hierarchy Motif Pfam:  DNA_ligase_aden DNA_ligase_OB RNA_ligase HHH_5 DUF3701 Motif Other DBs NCBI-ProteinID:  UXZ96696 LinkDB All DBs Position complement(430081..431754) Genome browser AA seq 557 aa AA seqDB search MRILTAITLMIASLTTHASSCPDWTPAKARHSITTLQTQIAAWDDSYHRQGISLIADEIY DQSRQRLEFWRSCFAKPTSEADNPLKTAKGTVPHPVPHTGVNKLSDEAAVRDWLKGRTDL WIQPKIDGVAVTLVYERGELAQVISRGDGVAGQDWTGHAQHIAAIPAHLPWQETLVLQGE LYLRLENHVQARAGSVNARSKVAGMLARNELHTEEADLIGLFVWDWPAGPISMTERMTGL NALGFGDSAQYSQPLESFAQAYHWREHWYRNPLPFATDGVIIRQGERPPVQRWQAKAPYW IAAWKYPFAQALAEVRKVNFNIGRSGKITPVLELEPVRLDDRQISRISVGSLQRWQTLDI RPGDQVSVSLAGLTIPRLDSVVSRSVERSDLQIPEAKDFHALSCWQPGPGCESQFRARLA WLSGKKGLALTGVGPGTWDNLISAGKINGLLDWLTLEKEQLANISGLGERSSAKLLDSLQ EARTRPFALWLKAIGLPPTGNAHLGEQWSELEKRTAQQWQMEPGIGSGRASQLVAFFQHP QVQALAEQLRAQGISGF NT seq 1674 nt NT seq  +upstreamnt  +downstreamnt atgcgcatattgaccgcaatcaccctcatgatcgccagccttacgacccatgccagctca tgccccgactggacgcccgccaaagcccggcactcaatcaccaccctgcaaacacaaatc gccgcctgggatgacagctatcaccgccaaggcatttcgctgattgccgatgaaatttat gaccaatcccgccagcggcttgagttctggcgatcatgttttgccaaaccaacaagcgaa gccgacaacccgctgaaaactgccaaagggacggttcctcatcctgttccgcacacgggc gtcaacaagctcagcgatgaagccgcagtgcgcgactggctcaagggtcgcactgacctg tggattcaacccaagattgatggggtagcggtaaccctggtctatgagcgcggagaactg gctcaagtgatcagtcgcggcgatggcgttgcgggacaggactggaccggacacgcgcaa cacatcgcagccattcctgcgcacttgccctggcaggaaaccctggtgctgcaaggtgag ttatatctgcgtctggaaaaccatgtgcaagcccgggccgggagtgtgaacgcgcgcagc aaagtcgccggcatgctggctcgtaacgaattacacaccgaagaggccgacctgatcggc ttgttcgtgtgggactggcccgcgggaccgatctccatgaccgaacgcatgacaggcttg aacgcattgggtttcggtgacagcgctcaatacagccagccgctggaaagctttgctcag gcgtatcactggcgcgagcactggtatcgcaacccgctgccgtttgctactgatggcgtc atcatccgtcagggggagcgtccaccggtacagcgctggcaagccaaggcaccctattgg atcgcggcctggaaatacccgtttgctcaagcgctggcggaagtgcgcaaggtcaacttc aacatcggccgtagcggcaagataacccccgtgctggagttggagcctgtgcgcctggat gaccggcagatcagtcgcatcagtgtgggttcgctgcaacgctggcagacgctggatata agacccggcgatcaagtgtcggtgagtcttgcaggcctgaccatcccgcgactggacagc gtcgtgtcacgcagtgtcgagcgcagcgacttgcagattcccgaggccaaagactttcat gccctcagttgctggcaacccggcccaggctgtgaaagccagtttcgcgcaagacttgcc tggctcagcggcaagaaaggtctggcgctgaccggagtcggtccaggtacgtgggacaac ctgatcagcgccgggaaaatcaacggtttgctcgactggctgacccttgaaaaagaacag cttgctaacatttccgggctcggtgagcgcagcagcgctaaactgctcgacagtttgcag gaggctcgcaccaggccgtttgctttgtggctaaaggctatcggcctgccgcccacgggg aatgctcatctgggcgagcagtggagtgagttggagaagagaacggcgcagcaatggcaa atggagccgggcataggctcgggtcgtgccagtcagttggtcgccttcttccagcatcct caggttcaagccttggctgagcaattacgagcccagggtatttcaggtttttaa

DBGET integrated database retrieval system