Phlebotomus papatasi: 129803702
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Entry
129803702 CDS
T10447
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
ppap Phlebotomus papatasi
Pathway
ppap03018
RNA degradation
ppap03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppap00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
129803702
09123 Folding, sorting and degradation
03018 RNA degradation
129803702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppap03019
]
129803702
03041 Spliceosome [BR:
ppap03041
]
129803702
Messenger RNA biogenesis [BR:
ppap03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
129803702
mRNA degradation factors
5'-3' decay
Lsm complex
129803702
Spliceosome [BR:
ppap03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
129803702
Complex C
U2 snRNP components
129803702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
TIG_SUH
DUF150_C
HydF_dimer
Glutaredoxin
Motif
Other DBs
NCBI-GeneID:
129803702
NCBI-ProteinID:
XP_055706430
LinkDB
All DBs
Position
2:9648405..9648908
Genome browser
AA seq
99 aa
AA seq
DB search
MADDEQSIPVKEPLDLIRLSLDEKIYVKMRNERELRGRLHAFDQHLNMVLGDAEETVTVC
EVDEETYEEVYKTTKRTIPMLFVRGDGVILVSPPMRVGG
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgatgaacaaagtattcctgttaaagaacccctggaccttatccgattgagt
ctggatgagaaaatctacgtgaaaatgcgaaatgaaagggagcttcggggccgattgcat
gccttcgatcaacacttgaacatggttctgggagatgcagaggagacagtgactgtatgt
gaggtcgatgaggagacctacgaggaggtctacaagacaactaagagaacaattcccatg
ctctttgtgcgtggagatggtgttattcttgtttccccgcccatgagggttggaggatag
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