Pectobacterium parmentieri RNS 08-42-1A: A8F97_02440
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Entry
A8F97_02440 CDS
T04513
Name
(GenBank) aminoglycoside/multidrug transporter permease
KO
K18138
multidrug efflux pump
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar01501
beta-Lactam resistance
ppar01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
A8F97_02440
01503 Cationic antimicrobial peptide (CAMP) resistance
A8F97_02440
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppar02000
]
A8F97_02440
01504 Antimicrobial resistance genes [BR:
ppar01504
]
A8F97_02440
Transporters [BR:
ppar02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
A8F97_02440
Antimicrobial resistance genes [BR:
ppar01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
A8F97_02440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AOR57771
UniProt:
A0A8B3FCU4
LinkDB
All DBs
Position
complement(572970..576098)
Genome browser
AA seq
1042 aa
AA seq
DB search
MAKFFIDRPIFAWVLAIMVMLTGLLAIVKLPIAQYPTIAPPAIDVTATYPGADASTLQDS
VTQVIEQNMNGIDNLMYMSSSSDSSGTVQITLTFQAGTDPDIAQVQVQNKLQLAMPLLPQ
EVQQQGVNVQKSSSSFLMVAAFISEDGKMSQEDIADYVAANVKDPISRTSGVGDAQLFGS
QYAMRIWLDPNKLNNYQLTAGDVSAAIRVQNNQIAAGQLGGAPPVPGQQLNASIIAQTRL
NSAEEFSKILLKVNADGSQVRLKDVARVELGAEGYDVIARFNGKPAAGIGIKLATGANAL
DTATAVKDALTKAEEFFPSGLKVVYPYDTTPFVKISINEVVKTLVEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLPPKEATKRSMEQIQGALVGIALVLSAVFVPMAFTGGSTGAIYRQFSITIVSAMVL
SVLVALILTPALCATLLKPIAKGDHSEKTGFFGWFNKVFEKSTHHYTDSVANILRSTGRY
LVIYLLIVVGLALLFLRLPTSFLPDEDQGVLLNIVQLPSGATQENTQKIMDRMTQYYLEN
EKNNVKSVFTVTGFGFSGRGQNAGLAFASLNDWSERSGAENKVQAIAARANAVFSQYKEA
IVIAANVPAIIELGTATGFDFQLIDQANLGHAKLTEARNQLLGMAAQRPDTLIQVRPNGM
EDTPQFRLDIDQEKAQALGVSLADISSTLATTLGGSYVNDFIDRGRVKKVYVQADAPFRM
LPDDIKNWYIRGNNGQMVPFSAFTQSHWEYGSPRLERYNGQPSMQIQGEAAPGKSTGEAM
ALMEEFVTKLPQGIGYQWTGMSYQERLSGNQAPAIYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGIIGALIAANMTGLQNDVYFKVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLI
EATLDAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMITATVLAIFF
VPVFFVVVRRRFGKKIDDTTAH
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttttttatagatcgacccatttttgcatgggtactcgccatcatggtgatg
ctgacggggttgctggcaattgttaaattacctattgcccagtatccaacgatcgcccca
cccgcgattgacgtaacagcaacttatccaggggccgatgcatcaacgctgcaagattcc
gtcactcaggttatcgaacagaatatgaacggtatcgataacctgatgtacatgtcatca
agcagcgactcctcaggtacggtccagattacgctgacctttcaggcaggtaccgatccg
gacatcgcacaggttcaggtgcagaacaaactgcaactggccatgccgctgctgccgcag
gaagtacagcaacaaggggttaacgttcagaaatcaagtagcagcttcctcatggttgcc
gccttcattagtgaagacggtaaaatgtcacaggaagatatcgctgactacgtggccgct
aacgttaaagaccctatcagccgtacatcaggcgtaggcgacgcgcagctatttggctcc
cagtatgccatgcgtatctggctggatccgaacaagctaaataactatcagttaaccgca
ggtgacgtcagcgcagcaattcgtgttcaaaataaccagatcgccgcagggcaattgggg
ggcgctccaccggttcccggccagcagttgaatgcctcgatcattgctcagacccgtctg
aattcagcagaagaattttctaaaatactgctgaaagttaacgctgatggatctcaggtt
cgccttaaagacgttgcacgtgttgagctgggagcagaaggctacgacgttattgcacgt
ttcaacgggaaaccggctgccggtatcggtatcaaattggcaacaggcgctaacgcgctg
gataccgcaactgccgtaaaagatgcactgaccaaagcagaagagttcttcccttccggc
ctgaaagtcgtttacccttacgatacaacgcctttcgttaagatttccatcaacgaagta
gtgaaaacactggtggaagccatcgtactggtcttcctggtgatgtatctgttcttgcag
aacttccgcgccacgctgatcccaactatcgcggtaccggtcgtcttgctggggacgttt
gctatcctctctgcgtttggttattccattaacaccttgacgatgttcgcgatggttctc
gccatcgggcttctggtggatgacgccatcgtcgtcgtggaaaacgtggaacgtgtcatg
gcggaagaaggtctaccgcctaaagaagcgacaaaacgctccatggagcagatccaaggc
gcgttggtcggtattgcactggtactgtccgcagtattcgtcccgatggcgtttaccggt
ggctccacaggggcaatctatcgccagttctccatcacaatcgtttctgcgatggtgctg
tcagttctggttgcattgattttgacaccagccctttgtgcaacactgctaaaaccgatc
gccaaaggtgatcacagtgagaaaactggcttcttcggctggttcaacaaagtgtttgag
aagagcacgcatcactacaccgacagcgttgctaatattctgcgtagtactggtcgttat
ctggttatctatctgctgattgttgtgggcctcgcactcttgttcttacgtttgccgacg
tccttcctgccagacgaagaccaaggggttctcctgaacattgttcagttgccttcaggt
gcgacgcaggaaaacacccaaaaaatcatggacagaatgacgcaatattatctcgaaaat
gagaaaaataacgtcaagtctgtgtttaccgtgacgggcttcgggttctctggtcgtggg
cagaatgccggtttagccttcgccagcttgaatgactggagtgagcgaagcggcgcagag
aataaagtccaggcgattgcagccagagctaacgcagtcttcagtcagtataaagaagct
atcgtgattgcggccaacgttcctgcgattatcgaactgggtacggcaacgggcttcgac
ttccagttaattgaccaggctaacctgggacatgcaaaactaacggaagcacgtaaccag
ttgctgggtatggcggcacaacgccctgatacgttgatacaagttcgtcctaacgggatg
gaagatacaccgcagttccgtctcgatatcgatcaagaaaaagcgcaagcacttggcgtg
tcattggctgatattagctcaacgctggcaacaacgttgggtggatcttatgtgaatgac
tttatcgatcgcggtcgcgtgaagaaagtctacgttcaggctgatgcgcctttccgtatg
ttgccggatgacatcaagaactggtacatccgcggtaacaacggacaaatggtgccattc
tctgcatttacgcagagccactgggaatacggttcaccacgtctggagcgttataacggc
cagccatccatgcaaatccagggcgaggcagctccaggtaagagtactggtgaagccatg
gcattgatggaagaattcgtcaccaaattaccgcaaggtattggctaccaatggacgggg
atgtcctatcaggaacggttatctggtaatcaggcacctgcaatctatgctatttcactg
attgttgtgttcctgtgtctggcagcgctttatgagagctggtcaataccgttctccgtc
atgctggttgttccactggggatcatcggtgcattgattgcggcgaatatgacgggtctt
caaaatgacgtttactttaaggtgggcctgctgacaaccatagggctatccgcgaagaac
gccatattgatcgtcgaatttgctaaagatttgatggataaagaagggaaaggcctgata
gaagcaacgctggatgcagtacgtatgcgtttacgtccaatcctgatgacatcacttgcc
tttatcctcggcgtaatgccgctggtaatcagtagtggtgcgggttccggtgcacaaaac
gccgttggtactggcgtaatgggcgggatgattacagcaaccgtgctggctatcttcttc
gttcccgtgttcttcgttgtggttcgtcgtcgctttggtaagaaaatcgacgatacaaca
gcccactaa
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