Pectobacterium parmentieri RNS 08-42-1A: A8F97_12400
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Entry
A8F97_12400 CDS
T04513
Name
(GenBank) 3-isopropylmalate dehydratase small subunit
KO
K01704
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00290
Valine, leucine and isoleucine biosynthesis
ppar00660
C5-Branched dibasic acid metabolism
ppar01100
Metabolic pathways
ppar01110
Biosynthesis of secondary metabolites
ppar01210
2-Oxocarboxylic acid metabolism
ppar01230
Biosynthesis of amino acids
Module
ppar_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
A8F97_12400
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
A8F97_12400
Enzymes [BR:
ppar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
A8F97_12400
4.2.1.35 (R)-2-methylmalate dehydratase
A8F97_12400
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_C
FAD_syn
Motif
Other DBs
NCBI-ProteinID:
AOR59701
UniProt:
A0A8B3FA43
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All DBs
Position
complement(2734467..2735078)
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AA seq
203 aa
AA seq
DB search
MDTFKKISGLAAPMLAANIDTDVIMPKQFLKGIDRQGLDKGLFYDLRFNADGTENSDFIL
NTPQWKGSKFLVTGPNFGCGSSREHAVWGMKQLGIRALIGTSFAGIFNDNCLRNGVLTIT
LAEDKMSELARIISHIETNEILIDLENQIISTEKEDFTFNVDELKKEMLVQGLDAIGLTL
SFKDEIIQFENEYYSENPWHKVS
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggatacgtttaagaaaatttcaggactggccgctcccatgctagccgctaacatcgat
actgacgtcattatgcctaaacagtttcttaaaggtattgatcgtcaggggcttgataaa
ggccttttttacgacctgagatttaatgctgatggcactgaaaattcagatttcattctt
aatacacctcaatggaagggttcaaaattcctggttaccggaccaaattttgggtgcgga
tccagccgtgaacatgctgtatgggggatgaaacaattaggtattcgcgccctgattggc
acttcttttgcgggaatattcaatgataattgcctacgcaatggtgttctgactatcact
cttgcggaagataaaatgagtgaactggctaggattatttcccacattgaaacaaatgaa
atcctgattgatcttgagaaccagatcatcagtaccgaaaaagaagattttacatttaat
gtagatgaactgaagaaagagatgttggtacaaggtctggatgcaattggcttaacgtta
tcctttaaggatgaaattatccagtttgaaaatgaatattattcggaaaatccatggcac
aaagtaagctga
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