Pectobacterium parmentieri RNS 08-42-1A: A8F97_15020
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Entry
A8F97_15020 CDS
T04513
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
ppar
Pectobacterium parmentieri RNS 08-42-1A
Pathway
ppar00020
Citrate cycle (TCA cycle)
ppar00270
Cysteine and methionine metabolism
ppar00620
Pyruvate metabolism
ppar00630
Glyoxylate and dicarboxylate metabolism
ppar00680
Methane metabolism
ppar00710
Carbon fixation by Calvin cycle
ppar00720
Other carbon fixation pathways
ppar01100
Metabolic pathways
ppar01110
Biosynthesis of secondary metabolites
ppar01120
Microbial metabolism in diverse environments
ppar01200
Carbon metabolism
Module
ppar_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppar_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ppar_M00012
Glyoxylate cycle
ppar_M00168
CAM (Crassulacean acid metabolism), dark
Brite
KEGG Orthology (KO) [BR:
ppar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
A8F97_15020
00620 Pyruvate metabolism
A8F97_15020
00630 Glyoxylate and dicarboxylate metabolism
A8F97_15020
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
A8F97_15020
00720 Other carbon fixation pathways
A8F97_15020
00680 Methane metabolism
A8F97_15020
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
A8F97_15020
Enzymes [BR:
ppar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
A8F97_15020
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Semialdhyde_dh
GFP
Motif
Other DBs
NCBI-ProteinID:
AOR60196
UniProt:
A0A0H3I0A4
LinkDB
All DBs
Position
complement(3310337..3311272)
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AA seq
311 aa
AA seq
DB search
MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPTAVKIKGYSG
EDAKPALAGADIVLISAGVARKPGMDRSDLFNVNAGIVRNLVEQIAVTCPKACIGIITNP
VNTTVAIAAEVLKKAGVYDKNKLFGVTTLDIIRSNTFVAELKGKQPQDINVPVIGGHSGV
TILPLLSQVPGISFSEQEVADLTKRIQNAGTEVVEAKAGGGSATLSMGQAAARFGLSLVR
ALQGESGVVECAYVESDGKHARFFAQPILLGKDGVAERKDIGALSAFEQNALNSMLDTLK
QDIELGETFIK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgcagttctcggagcagcaggtggtatcggtcaggcactcgcactcctcctc
aaaacccagcttccttcaggttcagaactatccctttacgatattgctccggtaacaccg
ggtgttgctgtcgatctgagccatattcctacagcagtgaagatcaaaggctatagcggt
gaagacgctaaaccagcgcttgctggtgcggatattgtgctgatttccgctggcgtggca
cgtaaacctggtatggatcgttccgatctgttcaatgtcaacgcaggtattgtgcgcaac
ctggttgagcaaattgcggttacctgcccgaaagcctgcatcgggatcattactaacccc
gtgaacacgaccgtcgctattgcagccgaagtgctgaaaaaagccggcgtgtatgacaaa
aacaaactgttcggcgtaaccacgctggatatcatccgctccaacacgtttgttgctgag
ttgaaaggcaaacagccgcaggatattaacgtaccggttatcggtgggcactctggtgtg
acgattctgcctctgctgtctcaggttcctggtatcagcttcagcgaacaggaagtggcc
gatctgaccaaacgtattcagaatgcaggcaccgaggttgttgaagccaaagcgggtggc
ggatcggctacgctgtctatggggcaggctgctgcgcgttttggtttgtctctggtccgc
gcgctgcaaggcgaaagtggtgtggtggaatgtgcttacgttgaaagcgatggcaaacat
gcacgcttcttcgctcagccgattctgttaggtaaagatggcgtcgctgaacgtaaagac
attggcgcattaagtgcgtttgagcaaaatgcactaaacagtatgttggacacgctgaag
caggatattgagttaggcgagaccttcatcaaataa
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