KEGG   Pectobacterium parmentieri RNS 08-42-1A: A8F97_16425
Entry
A8F97_16425       CDS       T04513                                 
Name
(GenBank) type I-E CRISPR-associated protein Cas5/CasD
  KO
K19125  CRISPR system Cascade subunit CasD
Organism
ppar  Pectobacterium parmentieri RNS 08-42-1A
Brite
KEGG Orthology (KO) [BR:ppar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:ppar02048]
    A8F97_16425
Prokaryotic defense system [BR:ppar02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-E factors
    A8F97_16425
SSDB
Motif
Pfam: Cas_Cas5d
Other DBs
NCBI-ProteinID: AOR60466
UniProt: A0A8B3FFM4
LinkDB
Position
complement(3630277..3631011)
AA seq 244 aa
MDNYLVFQIYAPLVSWGEAAVGEVRHTSTVPSRSALLGLLAAALGIRRDDRAALTAFNQH
YSVAVRPLSDRETWLNDYHTVQMPKENRKVPRYTRRDELRPEAGQSLETMLTSREYRCDA
YYHIAISVTPDAPYSLTALRDALLSPVFALYFGRKSCPPALPLAPHLFSGSLAEVWQQAR
QTPALNDLALQLIGRAEGLCYWEQESDTGLTPQYRVVRNDQPADRRRWQFTSRVQYVGSE
KGEE
NT seq 735 nt   +upstreamnt  +downstreamnt
atggataactatctggttttccagatctatgccccgctggtgtcatggggagaagcggcg
gtcggtgaagtgcgccacacctcaacggtgcctagccgttccgccctgttggggttactg
gcggcggcgctagggattcgacgtgacgatcgggctgctctgacggcgtttaaccagcat
tactctgtggcggtgcggccgctttccgatcgcgaaacctggctgaatgactaccacacg
gtgcagatgccgaaagaaaaccgcaaagtgccacgctatacccggcgtgatgaactgcgg
ccggaggcggggcaatcacttgaaaccatgctgacctcacgcgaataccgctgtgatgcc
tattaccacattgccattagcgtcacaccggatgcgccttattcgctaactgcgttgcgt
gacgcgctgttatctccggtgtttgcgctctattttgggcgtaaaagttgcccgcccgct
ctgccgctggcaccgcacctattttcaggctcgctggccgaggtgtggcagcaggcaagg
cagacgcctgcactgaacgatctcgcgttacagttaatcggtcgcgccgaagggctgtgc
tactgggaacaggaaagcgacaccgggttaacgccgcaataccgtgttgtgcgcaacgat
cagcctgccgatcgacggcgctggcagttcacttcccgcgtgcaatacgtcggtagtgag
aagggagaggaataa

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