Pectobacterium parvum: LOZ86_15480
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Entry
LOZ86_15480 CDS
T07916
Name
(GenBank) multidrug efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ppav
Pectobacterium parvum
Pathway
ppav01501
beta-Lactam resistance
ppav01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppav00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOZ86_15480
01503 Cationic antimicrobial peptide (CAMP) resistance
LOZ86_15480
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppav02000
]
LOZ86_15480
01504 Antimicrobial resistance genes [BR:
ppav01504
]
LOZ86_15480
Transporters [BR:
ppav02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
LOZ86_15480
Antimicrobial resistance genes [BR:
ppav01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LOZ86_15480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
UFK38332
LinkDB
All DBs
Position
3450351..3453479
Genome browser
AA seq
1042 aa
AA seq
DB search
MAKFFIDRPIFAWVLAIMVMLTGLLAIVKLPIAQYPTIAPPAIEVTANYPGADASTLQDS
VTQVIEQNMNGIDNLMYMSSSSDSSGTVQITLTFDAGTDADIAQVQVQNKLQLAMPLLPQ
EVQQQGVNVQKSSSSFLMVAAFISEDGKMSQEDIADYVAANVKDPISRTSGVGDAQLFGA
QYAMRIWLDPNKLNNYQLTSGDVTAAIRVQNNQIAAGQLGGAPPVPGQQLNASIIAQTRL
NSAEEFSKILLKVNADGSQVRLKDVARVELGAESYDTIARYNGQPAAGIGIKLATGANAL
DTATAVKNSLTKLEEFFPSGMKVVYPYDTTPFVKISINEVVKTLVEAIVLVFLVMYLFLQ
NFRATLIPTIAVPVVLLGTFAILSAFGYSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
AEEGLPPKEATKRSMEQIQGALVGIALVLSAVFVPMAFTGGSTGAIYRQFSITIVSAMVL
SVLVALILTPALCATLLKPIAKGDHGEKKGFFGWFNRLFEKSTHHYTDSVANILRSTGRY
LVIYLLIVVGLAVLFLRLPASFLPDEDQGVLLNIVQLPSGATQENTQKIMDRMTQYYLDN
EKGNVKSVFTVTGFGFSGRGQNAGLAFASLSDWSERSGKENKVLAIAGRANAAFSQYKEA
MVFAVNLPAIIELGTATGFDFQLIDQANLGHAKLTEARNQLLGMAAQRPDTLVQVRPNGM
EDTPQFRLDIDQEKAQALGVSLSDISSTLATTLGGSYVNDFIDRGRVKKVYVQADAPFRM
LPDDIKNWYIRGSNGQMVPFSAFTQSHWEYGSPRLERYNGQPSMQIQGEAAPGKSTGEAM
ALMEEFVTQLPQGIGYEWTGMSYQERLSGNQAPAIYAISLIVVFLCLAALYESWSIPFSV
MLVVPLGIIGALIAANMTGLENDVYFKVGLLTTIGLSAKNAILIVEFAKDLMDKEGKGLI
EATLDAVRMRLRPILMTSLAFILGVMPLVISSGAGSGAQNAVGTGVMGGMITATVLAIFF
VPVFFVVVRRRFGKKVDDTTAH
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggctaagttttttatagatcgacccatttttgcatgggtgctcgccatcatggtgatg
ctgacggggttgctggcaattgttaaattacctattgcccagtatccaacgatcgcacca
cctgcgattgaagtaacagcaaattatccaggggccgatgcatcaacgctgcaagattcc
gtgacgcaggttatcgaacagaatatgaacggtatcgataacctgatgtacatgtcatca
agcagtgactcttcaggtacagtgcagattacgctgacctttgacgcaggtacggacgcg
gacatcgcgcaggttcaggtgcagaacaaactgcaactggccatgccgctgctgccgcag
gaagtacagcagcaaggggttaacgttcagaaatcaagtagcagcttcctcatggttgcc
gccttcattagtgaagacggtaaaatgtcgcaggaagatatcgctgactacgtggctgct
aacgttaaagatcctatcagccgtacatccggcgtaggtgacgcacagctgtttggtgct
cagtatgcgatgcgtatctggctggatccaaacaaactgaacaactatcagttaacttca
ggtgatgtcactgcagcaatcagagtccaaaacaaccagatcgcagcaggacaactgggg
ggagcaccacccgttcccggccaacagttgaacgcctcaatcattgctcaaactcgactg
aactcagcagaagagttttctaaaatcctgctgaaggttaacgctgacggctctcaggtt
cgtcttaaagacgttgcccgcgttgaattgggcgcagaaagctatgacacgattgcacgt
tacaatggtcagcccgctgctggtatcggtatcaagctggcgacaggcgcgaatgcgctg
gataccgcaactgccgtaaaaaactcactaacaaaactggaagagttcttcccttctggc
atgaaagtggtttacccgtatgatacaacgcccttcgttaagatctcgatcaacgaagta
gtgaaaacactggtagaagccatcgtactggtattcctggttatgtatctgttcttgcag
aacttccgtgccacgctgatcccaaccatcgcggtaccggtcgtgttgctggggacattt
gctatcctctccgcgtttggttattccattaacaccttgacgatgttcgcgatggttctc
gccatcgggcttctggtggatgacgccatcgtcgtcgtggaaaacgtggaacgtgtcatg
gcggaagaaggtctgccgcctaaagaagcgacaaaacgctccatggagcagatccaaggt
gcgttggtcggtattgcactggtcctgtccgcggtattcgtcccaatggcgtttaccggt
ggttcgacaggggcaatctaccgccagttctccatcactatcgtttctgcaatggtgctg
tcggttctggtcgcattgattttgacacctgctctttgtgcaacgctgttaaaaccgatt
gccaaaggcgatcacggtgagaagaaaggcttcttcggctggttcaacagactgttcgag
aaaagtacccatcactacaccgatagcgtggcaaacatcctgcgcagcacgggtcgttat
ctggtcatctatctgctgattgttgtgggtctggcagtgttgttcttacgtttgcccgcg
tccttcctgccagacgaagaccaaggggttctcctgaatattgttcagttgccttccggt
gcgacgcaggaaaatacgcagaaaatcatggacagaatgacgcaatactatctcgacaat
gagaaaggtaacgtcaagtctgtgtttaccgtgacgggcttcgggttctctggtcgtggg
cagaatgccggtctggctttcgccagcctgagtgactggagtgaacgaagcggcaaagaa
aataaagttctggcgattgcaggccgagcaaacgcagcctttagccagtataaagaagcg
atggttttcgcagtcaaccttcctgcgattatcgaactgggtaccgcaacaggtttcgac
ttccagttgattgaccaggctaaccttgggcacgcgaaactgacggaagcacgtaaccaa
ctgctgggcatggcggcacaacgtcctgatacgctggtgcaagttcgtcctaacgggatg
gaagatacaccgcagttccgtctcgatatcgatcaggaaaaagcacaagcgcttggtgtg
tcactgtcggatatcagttcaacattggcaaccacgctgggtggttcttatgtaaatgac
tttatcgatcgcggtcgcgtgaagaaagtttacgttcaggccgatgcgcctttccgtatg
ttgccggatgacatcaaaaactggtacatccgcggtagcaacggacaaatggtgccattc
tctgcattcacgcagagccactgggaatatggttcaccgcgtctggaacgttataacggc
caaccatccatgcagatccaaggtgaagccgcgccaggtaagagtaccggtgaggccatg
gcactaatggaagagttcgtcacccaattgccgcagggtattggctacgaatggacgggt
atgtcctatcaagagcggttatcaggcaaccaggcaccggcaatctatgccatttcactg
attgttgtgttcctgtgtctggcggcgctttatgagagctggtcaatcccgttctccgtc
atgctggtggttccattggggattatcggtgcgttgattgcggcgaatatgacaggtctt
gaaaacgacgtttactttaaggtgggcctgctgacaaccatagggctatcggcgaagaac
gccatattgattgtcgaatttgctaaagatctgatggataaagaaggaaaaggactgatt
gaagcaacgcttgatgccgttcgtatgcgtttacgtccaatcctgatgacatcacttgcc
tttatcctcggtgttatgccgctggtaatcagcagtggtgccggttccggtgcacagaac
gccgttggtactggcgtaatgggcgggatgattaccgcaaccgtgctggctatcttcttc
gttcctgtgttctttgttgttgtccgccgtcgcttcggcaagaaagtcgacgacacaaca
gcgcactaa
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