Pseudopropionibacterium propionicum: HMPREF9154_0352
Help
Entry
HMPREF9154_0352 CDS
T02180
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ppc
Pseudopropionibacterium propionicum
Pathway
ppc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF9154_0352 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppc03400
]
HMPREF9154_0352 (nth)
Enzymes [BR:
ppc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HMPREF9154_0352 (nth)
DNA repair and recombination proteins [BR:
ppc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF9154_0352 (nth)
Prokaryotic type
HMPREF9154_0352 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
HHH_8
Motif
Other DBs
NCBI-ProteinID:
AFN46674
LinkDB
All DBs
Position
366807..367424
Genome browser
AA seq
205 aa
AA seq
DB search
MTAALIGSRLAAAYPDARCDLDHRSPFELLVAVVLSAQTTDARVNQVTPELFARYPDAEH
LAGAEQDDVEEIISSLGLYRSKARSLTGLARALVADHDGRVPDSLDELVKLPGVGRKTAN
VVLGDAFGIPGITPDTHVIRVSNRLGWVHSTKPDDVERAVGALFPPGEWVVLCHRIIWHG
RRCCRARTPACTACPVEDLCPSSQA
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcggccctgatcggatccaggctcgcggccgcctacccggatgcccgctgcgac
ctggaccaccggtcacccttcgaactgctcgtcgcagtcgtcctgtccgcccagaccacc
gacgcccgcgtcaaccaggtcaccccggagctgttcgcccgctatcccgacgcggaacac
ctcgcgggggcggaacaggacgacgtcgaggaaatcatcagcagcctcgggctgtaccgg
tccaaggcgagatcgctgaccgggctggcccgcgcactcgtcgccgaccatgacggccgg
gtaccggacagcctcgacgaactggtgaagctccccggggtggggcgcaagaccgccaac
gtcgtgctcggggacgccttcggtatccccgggatcacccccgacacccacgtaatccgc
gtctcgaaccggctcggctgggtgcactccaccaaacccgacgacgtggaacgcgccgtc
ggggcgctgttcccgcccggcgagtgggtggtgctctgccaccggatcatctggcacggt
cgccgctgctgccgcgcccgcacacccgcctgcaccgcctgccccgtggaggatctgtgt
cccagctctcaggcctga
DBGET
integrated database retrieval system
