Pseudomonas pergaminensis: KUA23_05965
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Entry
KUA23_05965 CDS
T08563
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ppeg
Pseudomonas pergaminensis
Pathway
ppeg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KUA23_05965 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppeg03400
]
KUA23_05965 (nth)
Enzymes [BR:
ppeg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KUA23_05965 (nth)
DNA repair and recombination proteins [BR:
ppeg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KUA23_05965 (nth)
Prokaryotic type
KUA23_05965 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_5
DUF2400
HHH_8
DUF4817
Motif
Other DBs
NCBI-ProteinID:
USW02271
UniProt:
A0ABD7TLI0
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All DBs
Position
complement(1335895..1336533)
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AA seq
212 aa
AA seq
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MNAAKRLEIFRRLHEDNPEPKTELAYTTPFELLIAVILSAQSTDVGVNKATAKLYPVANT
PEAIHALGVEGLSEYIKTIGLYNSKAKNVIETCRLLMELHGSEVPQTREALEALPGVGRK
TANVVLNTAFRQLTMAVDTHIFRVSNRTGIARGKNVVEVEKQLMKFVPKPYLLDSHHWLI
LHGRYVCQARKPRCGSCRIEDLCEYKDKTSDD
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgctaaacgcctggaaattttccgcaggcttcacgaagacaatcctgaaccg
aagaccgaactggcttacaccacgccgttcgagttgctgattgcggtgatcctgtcggcc
caatccaccgacgtcggcgtcaacaaggctaccgccaagctgtatcccgtggcgaatacg
ccggaggcgatccatgccctgggtgtggaagggttgtcggaatacatcaagaccatcggc
ctctacaacagcaaggccaagaatgtgatcgagacctgtcgcctgctgatggaactgcat
ggcagtgaagtgccacaaacccgtgaagccctggaagccctgccgggcgttggccgtaaa
accgccaacgtggtactcaacactgccttccggcaactgaccatggctgtggacacccac
attttccgggtcagcaaccgcaccggcattgcccgcggaaagaacgtggtggaggtggaa
aagcaactgatgaagttcgtacccaagccgtatctgctggattcccaccactggctgatc
cttcacggacgctatgtttgccaggcccgcaagccgcgctgtggcagttgtcgcatcgaa
gacttgtgcgaatacaaggacaagacgtccgacgattga
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