Prunus persica (peach): 18785803
Help
Entry
18785803 CDS
T03092
Name
(RefSeq) uncharacterized protein LOC18785803
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
pper
Prunus persica (peach)
Brite
KEGG Orthology (KO) [BR:
pper00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pper03036
]
18785803
03400 DNA repair and recombination proteins [BR:
pper03400
]
18785803
Chromosome and associated proteins [BR:
pper03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
18785803
DNA repair and recombination proteins [BR:
pper03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
18785803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c_3
SMCHD1_S5
TACC_C
Motif
Other DBs
NCBI-GeneID:
18785803
NCBI-ProteinID:
XP_020413051
LinkDB
All DBs
Position
G2:29322965..29341356
Genome browser
AA seq
1759 aa
AA seq
DB search
MLQRTKKSQMLEDHGDKDRAYRFKILLPNGTSVCLTFQNPKPTMPFGDFIQRLEEEYSLT
YRRFSSGKRKRDIDWKGGCLFLEDANDRKIRGEMNFKNFKPHECHILKLHDGSHESAYTF
ENMWDLTPVTDILKELPEEYTFETALADLIDNSLQAVWANDRRHKKLISVDVADDVISIF
DTGPGMDGSDEHCIVKWGKMGASLHRSLREQAIGGRPPYLTPFFGMFGYGGPLASMQLGR
HALVSSKTKDSRKVYTLHLDREALLTGSNSNIQKKRRGSDSDSNWKTDGGMRDPLEDEIS
KTPHGSFTKVEIFKPKSKLDISQLQCKLKDIYFPYIQCDEESKSGKTITPVNFEVNGVDL
AEIEGGEIAITNVHSCNGPDFVLQLHFSCKQDSMTKSPDSKAYIQANARLKCAYFPMVEG
KENIEKILERLESDGCGTSENFETYSRVSIRRLGRLLPDARWARLPFMEFKQKKGDKADL
LKICCLRVKCFIETDAGFNPTPSKTNLAHHSPFTTSLRNLGNQPLENEKDVRIKIYRDGN
HLTLSQLKKEYEDWILQMHERYDDEAHCGEDQPVLVVSPANKKALRISSEVARVHKSLKR
KGVTWKCGQKIKLLRGACAGVHNNNVYATIEYFLLEGLEGDPGGGARIICRPLSLSVDKG
CILKINDGDTSLDIRDSLSVPVSVIDSGKCLAVESNEWDNQLEKQRQKSPSTIDLLDVEE
CQELGVDGALPVDAPAGKVPPEVIVAVVRPASYVSSCASKTLDQKYIARTNLKMFMEVEF
RSDAEGLRNVRDISACAVPEPRKGIQGLYIFPLKSKYPALFQTSGVYTFSFHLTESNCKH
VEKRVLIKQAPIVEYKEIQFTCPNGKAPVIGTPKMEFDEIQVQSSHGKVLPLQDSSSIQQ
VGNLMVPVMKAPKVEYDESPIPCPNEKIFLLQDSSSLPQAQNLEASNVNKEKELEKDLHQ
SGMQIGDMEKNLDALNKEKAVIEQDIYVVQASVERCNSDYCSMKAELKHRIESMSHTAAS
TLCNLLRVPSQELSNDFMGGVIGLVALLGSTGSSELSRILSEYLGEDQMLAVVCRSFAAA
VALEKYEHNGEVDSRHALYAAAAKLGRSINGRFLVISLEDIQPYTGDFDGGDPQRKLALP
YPILPSGNTPDGFLGYAVNMVDLDEHHLHMTTAAGHGLRQTLFYFLFGELHVYKTRQDML
AARACIKHGAVSLDGGILRQTGAVSLGYGNPEICFPVLRSVAVMKKKIEIYKETMSAVIA
AIEEFTKDHQKALKKFRKKNKKWHELATVKERRLIKTTYRFLITRETSWSWREAYRVRAG
EKRTRKMFQPNNQISDHTKSLSIQDSTALMQVDEKETSLVMKDGMQNGGFAQAESIIYYT
KKLQDDLQMMGMKIKQHEDNIKLLKSQRNKLDDSILDLQVILGKYHTSTASKIENEDHSH
CKSEEETTKKILQREKSAAGILWQLKTRHGTQAAHLTLTKDVLGIVAMLGKVEDDNLSRL
LSEYLGIDTMLSIVCKTYEGVKALETYDNEGCIKKSSGLHGLGASIGRTLEGRFQVICLD
NLRPYAGEFVPDDPQRRLDLLKPRLPNGECPPGFLGYAVNMIHVDSTSLFCVTASGHGLR
ETLFYNLFFRLQIYKTRADMVPALPCISDGAISLDGGMIRSTGVFSLGNREDVDVRFPKL
SVTSSLPETYLDSERQINELKWKKEKMQEDMKREQALLDNAKFNFDRKKQDFLKFLADSS
SYATQHQFQAAAQSRVTSR
NT seq
5280 nt
NT seq
+upstream
nt +downstream
nt
atgctgcagcggacgaaaaagagccaaatgcttgaagatcatggtgataaggacagggca
tatagattcaagatcctattaccaaatggcacaagcgtttgtttgacatttcaaaatcct
aagcccacaatgccatttggagatttcattcaaaggctggaagaggaatactctctcact
tatagacgattcagctcagggaagcggaaaagggatattgattggaaaggtggttgctta
tttcttgaagatgccaatgataggaagataagaggtgaaatgaatttcaagaacttcaag
ccacatgagtgtcatattctaaagcttcatgatggttcccatgagagtgcttatactttt
gagaatatgtgggatctgacacctgttactgatatactaaaagaattaccagaagagtac
acatttgagactgctctggcagatttgattgataattccctccaagctgtttgggcaaat
gacaggagacataagaaacttataagtgtggatgtggctgatgatgtgatttcaattttt
gatactggccctgggatggatggaagcgatgaacattgtatagtgaagtggggaaagatg
ggtgcttcacttcacagatctttaagagaacaggcgatcgggggcagacctccgtactta
acgccattttttggaatgtttggttatggaggacctttagcatctatgcaattagggagg
catgcactagtttcttccaagacaaaggactccaggaaagtgtatacattgcatcttgac
agagaggctttactcacagggtcaaactctaatattcaaaagaaaagaagagggtcagac
tctgattctaattggaagactgatggtggtatgagggatcctttagaagatgaaattagc
aaaactccacatggaagctttactaaggttgaaatttttaaacctaaatcgaaattggac
atatctcaactccaatgcaagctgaaggatatatatttcccatatattcagtgtgatgaa
gaatccaaatcagggaagaccataacgccagtaaactttgaggttaatggtgttgattta
gccgagattgaaggtggggaaattgcaattacgaacgttcattcatgcaatggtcctgat
tttgttctacagcttcatttctcctgtaaacaagacagtatgactaaatctccagattcg
aaagcatatatacaagctaatgctcgcctcaagtgtgcctattttcctatggttgaggga
aaagagaatattgagaaaattttggagaggttagaatctgatggatgcggaacctcggaa
aactttgaaacctatagtcgtgtctctattcggaggcttggtcgcctacttccagatgct
cgctgggcccggcttccgttcatggaattcaagcaaaaaaaaggagataaggcagacttg
ttgaaaatatgttgtttgagagttaaatgctttatcgagactgacgctggtttcaatcca
acaccatctaagaccaatctagcacaccatagtccttttaccacttcactgaggaactta
ggcaatcagcctcttgagaatgaaaaagatgtcagaattaaaatatatagagatggaaac
catttaactctttctcaactaaagaaggagtatgaggattggattcttcaaatgcatgag
cgatatgatgatgaagctcactgtggtgaagatcaacctgttcttgttgtcagtcctgca
aacaaaaaggcacttcgcatttcatccgaagttgcaagggttcataaatctctaaagagg
aaaggagtgacctggaaatgcggccagaaaatcaaacttttaaggggagcatgtgctggg
gttcataacaacaatgtctatgccacaattgagtattttttgcttgaaggtctcgaaggt
gaccctggtgggggggctcgaattatttgcaggccattaagtctgtcagttgacaaggga
tgcatccttaaaataaatgacggggatacgagtttagatattcgtgactccttatctgta
cctgtcagtgtgattgattctgggaagtgtttagctgttgaaagtaatgaatgggataac
cagctcgagaaacaacgccagaaatctccttctacaattgatctgctggatgtagaagaa
tgtcaggagttgggggttgatggggcattgcctgtggatgccccagctggaaaagttcct
ccagaagtaattgtggctgttgttcgtcctgccagttatgtctcttcttgtgcgtcaaag
acccttgaccagaaatatattgctagaactaatttaaaaatgtttatggaagttgagttc
agaagtgatgctgagggtcttcgaaatgttcgcgacatttcggcatgtgcagtacctgag
ccacgtaaaggaattcaagggttatatatctttccacttaaatccaagtacccagcttta
tttcaaacttctggtgtctatacattttcattccatctgactgagtcaaattgtaagcat
gttgagaaaagagtattgatcaagcaagctccaatagtggagtataaagagatccaattc
acttgtccaaatggaaaggctcccgtaattgggactccaaaaatggagtttgatgagatt
caggttcagtcttcgcatggcaaggttttgcctctccaggattcctcttcaattcaacaa
gtaggaaacttaatggttcctgtaatgaaagctccaaaagtggagtatgatgagagtcca
atcccttgcccaaatgaaaagatttttcttctccaagattcctcttcccttccacaagca
caaaacttggaggcatcaaatgtgaataaggagaaggaattggagaaagaccttcaccaa
agtggaatgcagattggagatatggaaaaaaatttggatgcgcttaataaggagaaggca
gtaattgagcaagatatatatgttgtgcaagcttctgttgaacgttgcaattcagattac
tgttccatgaaagcagaattgaaacaccgcatagaaagcatgagccacactgcagcttct
acactctgtaaccttttaagagttccatcccaagagttgagcaatgatttcatgggaggc
gtgatcggtttggtggctttacttggtagtactgggagcagtgagcttagcaggatatta
tctgagtacttgggtgaagatcaaatgcttgctgttgtctgtagatcctttgcagctgct
gttgctcttgagaagtatgaacacaatggggaagttgattctaggcatgctctttatgca
gcagcagctaagcttgggagatccataaatggccggtttcttgttataagccttgaagat
atacagccttacacaggtgattttgatggtggtgaccctcaaaggaagctggccttgcca
tatcctatcttgccaagtggaaatactccggatggtttcttggggtatgcagttaatatg
gttgacctggatgagcatcatttacacatgacgacagctgcaggccatggtcttcggcag
acattgttttattttctttttggggagctccatgtttataaaactaggcaagacatgtta
gctgctcgtgcttgtatcaaacatggtgctgtatctctggatggtgggattttaagacaa
acaggagcagtttctctcggatatgggaatcctgaaatctgttttcctgtcttgcggagt
gttgcggtaatgaagaagaagattgaaatatacaaggaaacgatgagcgcggtcattgct
gccatagaggaatttaccaaagaccatcagaaagcgttaaagaaattccgcaagaaaaac
aagaagtggcacgagcttgcaacagtgaaggagcgtcggcttattaagactacctataga
ttcttaataaccagggagaccagctggagttggagagaggcatacagagtgagagcgggt
gagaaaagaaccagaaagatgttccaaccaaacaaccagatttcagatcatacaaagtca
ttatctattcaagattcaacagcattgatgcaagtggacgaaaaagaaactagtctagtt
atgaaggatgggatgcaaaatggaggattcgcgcaagcagaatccatcatctactacact
aagaaacttcaagatgatttacaaatgatggggatgaaaattaaacagcatgaagacaac
ataaaacttctgaagtctcagagaaacaaattagatgactctattctcgatttgcaagtt
attctagggaagtatcatacctcaactgcatctaaaatcgaaaatgaagaccattcccac
tgtaaaagtgaggaggaaacaaccaaaaagattcttcagcgtgagaagtctgctgcaggc
attttatggcagttgaaaactcgtcatggcactcaggctgcccatcttaccttgaccaag
gatgtcctgggtattgttgcaatgcttggcaaagtagaggatgataatcttagcaggctt
ttatcagaatacttaggaatcgatactatgttgtcaattgtctgtaagacttatgaaggt
gtcaaagctttagaaacgtatgacaatgaaggctgcataaagaaaagttctggtcttcat
gggcttggtgcttctattggaaggacattagaaggccgttttcaggtcatttgtcttgat
aatttaagaccatatgctggtgaatttgtacctgatgacccacagaggaggcttgatctt
ctgaagccaaggttacctaatggggaatgcccacccggttttcttggttatgcagtaaat
atgatccatgtggatagcacaagcttattttgtgtcacagctagtgggcatggcctgaga
gagactctattttataacctcttctttcgcttgcaaatatataaaacaagggcagatatg
gttcctgcacttccttgtataagtgatggagccatttctttagatggcgggatgattagg
tcaactggtgtgttttctcttggcaaccgggaagatgtagatgtgagatttcctaaactg
tcagtgacatcaagcctacccgaaacctatcttgattctgaaagacaaatcaatgagttg
aagtggaaaaaagaaaaaatgcaggaagatatgaagagagaacaagcattattggacaac
gcgaagttcaattttgacagaaagaagcaagattttctgaaattcctggctgatagctca
tcatatgcaactcagcatcaatttcaggcagcagcgcaaagccgagtgacctcaaggtga
DBGET
integrated database retrieval system
