Pseudomonas putida F1: Pput_4392
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Entry
Pput_4392 CDS
T00537
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppf
Pseudomonas putida F1
Pathway
ppf00300
Lysine biosynthesis
ppf00550
Peptidoglycan biosynthesis
ppf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pput_4392
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pput_4392
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppf01011
]
Pput_4392
Enzymes [BR:
ppf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
Pput_4392
Peptidoglycan biosynthesis and degradation proteins [BR:
ppf01011
]
Precursor biosynthesis
Amino acid ligase
Pput_4392
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
ABQ80515
UniProt:
A5W8Q5
LinkDB
All DBs
Position
complement(4913636..4915126)
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AA seq
496 aa
AA seq
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MMTMPLSKLFAHASRDPLIRELTLDSRNVRPGDLFLAVPGAKVDGREHIADALARGAAAV
AYEEQGASVLPLTDAPLIPVKGLIAQLSDIAGRFYGEPSRQLNLVGVTGTNGKTSVTQLV
AQALDLLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQSTLNDLKKGGAKAVAMEVSSH
ALEQGRVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAKAKLFAWPSLRCQVVNLDDDFGR
RLAADFARRPSVDHIETRLLSYSLENPEASLFCREAVFSDDGVRATLVTAQGERILRSQL
LGRFNLSNMLAAVATLLALDYALDEILKVTPQLQGPVGRMQRLGGGDKPLVVVDYAHTPD
ALEKVLEALRPHAHGKLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPSR
IFDDIRPGFTRPDDVEFVAGRGEAIAHLIATAAANDVIVLAGKGHEDYQEINGERHDFSD
LTEAEKALAAWEAPHA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatgccactaagcaaacttttcgcccacgccagccgtgatccattgattcgt
gagctgaccctggacagccgtaatgtgcgcccgggtgacttgttcctggcggtgccgggt
gccaaggtcgatggccgcgagcatatcgccgatgccctggcccgtggcgctgccgccgtg
gcctacgaagagcagggtgccagcgtgctgccgctgaccgatgcgccgctgattccggtc
aaaggcctgatcgctcagctgtcagacatcgccgggcgcttctacggtgaaccgagccgc
cagttgaatctggtcggcgtgaccggcaccaacggcaagacaagcgtgacccaactggta
gcccaggcactcgacctgcttggccagcgctgcggcctgattggcaccctggggaccggt
ttctacggcgagttgcagagcggccgtctgaccacgcccgacccgattgccgtgcaatcg
accctcaacgacctcaagaaaggcggcgccaaggccgtggccatggaagtgtcttcccat
gccctggagcaaggccgggttgccgcactggaattcgacatcgcggtgatgaccaacctg
tcccgcgaccacctcgactatcacggcagcatggaagcctatgaggccgccaaggccaag
ctgttcgcctggccgagcctgcgttgccaggtggtcaacctggatgacgactttggtcgt
cgtctggcggccgactttgcgcgtcgcccgagtgtcgaccatatcgaaacccggctgctg
agctacagcctggaaaaccctgaagcctcgctgttctgccgcgaagccgtattcagtgac
gatggcgtgcgcgccaccctcgtcaccgcccaaggtgagcgtatcttgcgcagccaactg
ctgggtcgcttcaacctgagcaacatgctggccgctgtggcgaccctgctggcgctggac
tatgcgctggacgagatcctcaaggtcacgccgcaactgcaggggccggtaggccgcatg
cagcgcctgggtggcggcgacaagccgctggtggtggtcgactatgcgcacacgccggat
gcacttgaaaaagtactcgaggccctgcgcccgcacgctcatggcaaactgttgtgcctg
ttcggctgcggcggtgaccgtgatcgcggcaagcgcccgctgatggccgaagtggccgag
cgcctggccgaccgcgtactggtcaccgacgacaacccgcgcactgaagatccgtcgcgc
atcttcgatgacattcgccccggtttcaccaggcctgacgacgtcgagttcgtcgccggg
cgtggcgaagccattgcgcacctgattgccaccgccgctgccaacgatgtgatcgtgctg
gccggcaaggggcacgaggattaccaggagatcaatggcgagcgccatgatttctccgat
ttgaccgaagccgaaaaggcacttgcagcctgggaggctccacatgcttaa
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