Pseudomonas putida GB-1: PputGB1_4517
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Entry
PputGB1_4517 CDS
T00650
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppg
Pseudomonas putida GB-1
Pathway
ppg00300
Lysine biosynthesis
ppg00550
Peptidoglycan biosynthesis
ppg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PputGB1_4517
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PputGB1_4517
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppg01011
]
PputGB1_4517
Enzymes [BR:
ppg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
PputGB1_4517
Peptidoglycan biosynthesis and degradation proteins [BR:
ppg01011
]
Precursor biosynthesis
Amino acid ligase
PputGB1_4517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
ABZ00404
UniProt:
B0KFT1
LinkDB
All DBs
Position
complement(5054506..5055996)
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AA seq
496 aa
AA seq
DB search
MMTMPLSKLFAHASRDPLIRELTLDSRNVRPGDLFLAVPGAKVDGREHIADALTRGAAAV
AYEEQGATVLPLTEVPLIPVKGLIAQLSDVAGRFYGEPSRQLNLVGVTGTNGKTSVTQLV
AQALDLLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQSTLYDLKKQGAKAVAMEVSSH
ALEQGRVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAKAKLFAWPSLRCQVVNLDDAFGR
RLAADFARRPSVDHIDTRLLSYSLENPDASLFCREAAFSDDGVRATIVTAQGERILRSQL
LGRFNLSNMLAAVATLLALDYALDEILKVTPQLHGPVGRMQRLGGGDKPLVVVDYAHTPD
ALEKVLEALRPHAHGKLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPQR
IFDDIRPGFARPVSVEFVAGRGEAIAQLIASAAANDVIVLAGKGHEDYQEINGERHDFSD
LTEAEKALAAWEAPHA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatgccattaagcaaacttttcgcccacgccagccgtgacccgctgattcgt
gaactgaccctggacagccgcaacgtgcgcccgggtgacctgttcctggccgtgccgggt
gccaaggtcgatggccgcgagcatatcgccgatgccttgacccgtggtgccgccgccgtg
gcctatgaagagcagggcgccaccgtgctgccgctgaccgaagtgccattgattccggtc
aagggcctgatcgcacagctgtcggatgtcgccgggcgtttttatggcgaacccagccgc
cagctgaacctggtcggtgtgaccgggaccaacggcaagaccagcgttacccaattggtg
gcccaggcgctcgacctgctcggccagcgctgcggcttgatcggcaccctgggtaccggc
ttctacggggagctgcagagcggccgtctgaccacgcccgacccgattgccgtgcagtcg
accctttacgatttgaaaaagcagggcgccaaggctgtggccatggaggtttcctctcac
gccctggagcaaggccgagtcgccgcattggagttcgacatcgcggtgatgaccaacctg
tcccgcgaccacctcgactaccacggcagcatggaggcctatgaggccgccaaggccaag
ctgttcgcctggcccagcctgcgttgccaggtggtcaacctggatgacgcctttggccgt
cgcctggccgctgactttgcccgccgtccgagcgtcgaccatatcgacacccggctgctg
agctacagcctggaaaacccagatgcctcgctgttctgtcgcgaggccgcgttcagtgac
gatggcgtgcgcgcgacgatcgttaccgcacaaggtgagcgtatcctgcgcagtcagctg
ctggggcgcttcaacctgagcaacatgctcgccgctgtcgcgacactgctggcactggat
tatgcactggacgaaatcctcaaggtcaccccgcaactgcacggtccggtaggccgtatg
cagcgcctgggtggcggcgacaaaccgctggtggtggtcgattacgcccacaccccggac
gcccttgaaaaagtgctcgaagcgctgcgcccacacgcccacggtaagttgctgtgcctg
ttcggctgcggcggcgaccgtgatcgcggcaagcgcccgctgatggccgaagtggccgag
cgcctggccgatcgcgtactggtcaccgatgacaacccacgtaccgaagacccacagcgc
atcttcgacgacatccgtcccggtttcgcccggcctgtctcggtcgagttcgttgccggt
cgtggcgaggccatcgcgcagttgattgcctccgctgctgccaacgacgtgatcgtgctg
gctggcaaggggcacgaggattaccaggagatcaatggcgagcgccatgacttctccgat
ttgaccgaagccgaaaaggcacttgcagcctgggaggcgccacatgcttaa
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