Pelodictyon phaeoclathratiforme: Ppha_0123
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Entry
Ppha_0123 CDS
T00731
Name
(GenBank) efflux transporter, RND family, MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pph
Pelodictyon phaeoclathratiforme
Pathway
pph01501
beta-Lactam resistance
pph01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pph00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Ppha_0123
01503 Cationic antimicrobial peptide (CAMP) resistance
Ppha_0123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pph03036
]
Ppha_0123
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pph02000
]
Ppha_0123
01504 Antimicrobial resistance genes [BR:
pph01504
]
Ppha_0123
Chromosome and associated proteins [BR:
pph03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
Ppha_0123
Transporters [BR:
pph02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
Ppha_0123
Antimicrobial resistance genes [BR:
pph01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Ppha_0123
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
YknX_C
HH_EMRA
Beta-barrel_RND_2
BSH_CzcB
HH_AAEA_pHBA
HH_CzcB
Motif
Other DBs
NCBI-ProteinID:
ACF42476
UniProt:
B4SB55
LinkDB
All DBs
Position
complement(138876..140030)
Genome browser
AA seq
384 aa
AA seq
DB search
MMKRSYIIAGLLVTLIAGWFLWPKGASEQRQDSGMKPEVSVVTMKPELLVLTKELPGRTS
AVRMAEIRPQVSGIVTKRFFVEGSLVQQGQQLYQIDPATYKAACNSAKASLSKAEANVIS
LQAKAGRYEELVKIGGVSQQEYDDAKASLAQARADVAMARSEVAAAAINLDYTRVMSPIS
GRIGQSKVTEGALVNANQADPLAVVQQLDQIYVDVSQSSGELIQLRQRHQGQVGDSSAGS
APIELLVDGKPKGEPGTLKFSDVTVNPSTGTVLLRILFTNPGNEILPGMFVHARLEQWRE
ENAILVPQKSVSRSADGSVSVWVVGPDGKANPRPIIVTEVVGERWLVSSGLKAGEKVVYE
GIMKIQPGMAVKTVEAALPPVPAR
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaggtcttatatcatcgccggtttgcttgtcaccctgattgccggctggttc
ctgtggccgaagggagcgtcagagcagcgtcaggattccggcatgaaaccggaggtcagt
gtcgtgaccatgaaacccgagctcctcgtcttgacaaaagagctgccggggcggacttcg
gctgtacgtatggccgagattcggccgcaggtgagtggcattgttacgaagcgcttcttc
gtggaaggaagccttgttcaacagggtcagcaactctaccagatcgaccccgcgacctac
aaggcagcctgtaacagtgcaaaagcgagcctcagcaaagccgaggccaacgtgatatcg
ctccaggccaaagcaggccgctacgaagagctggtcaaaatcggtggcgtcagccagcag
gagtatgacgatgcgaaagcgagccttgcccaggcgagggcagatgtcgccatggccaga
tccgaagttgctgcggcggctatcaatctcgactacaccagagtcatgtctccgatttcc
gggcgcatcggccaatcgaaggtgactgagggggctctggtcaatgccaatcaggccgac
ccccttgctgtggtgcaacagctcgaccagatctatgtggacgtctcccagtcgagcggg
gagctgatacaactgcgacagcgccatcagggccaggtgggcgattccagcgccgggagc
gctcctatcgagcttctggtggatggaaaacccaaaggagaacccggcacgctgaagttt
tcggatgtaacggtcaacccgagcaccggtacggtgctgctgcgcatattgttcaccaac
cccggcaatgaaatcctccccggcatgttcgttcatgcacgtcttgaacagtggagagag
gagaatgcgatcctcgtgccgcaaaaatcggtcagcaggagtgcggacgggtcggtttcg
gtctgggttgtcgggccggacggcaaggcaaaccctcgcccgatcatcgttacggaggtt
gtcggagagaggtggcttgtgagcagcggactcaaagcaggcgaaaaggtcgtgtacgaa
ggcatcatgaaaatccagcccggcatggcggtcaaaaccgtcgaggctgcactgccaccc
gtaccggcgagataa
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