KEGG   Phocoena phocoena (harbor porpoise): 136119873
Entry
136119873         CDS       T11058                                 
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1
  KO
K14381  sequestosome 1
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc04137  Mitophagy - animal
pphc04140  Autophagy - animal
pphc04217  Necroptosis
pphc04218  Cellular senescence
pphc04380  Osteoclast differentiation
pphc05014  Amyotrophic lateral sclerosis
pphc05022  Pathways of neurodegeneration - multiple diseases
pphc05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    136119873 (SQSTM1)
   04137 Mitophagy - animal
    136119873 (SQSTM1)
  09143 Cell growth and death
   04217 Necroptosis
    136119873 (SQSTM1)
   04218 Cellular senescence
    136119873 (SQSTM1)
 09150 Organismal Systems
  09158 Development and regeneration
   04380 Osteoclast differentiation
    136119873 (SQSTM1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    136119873 (SQSTM1)
   05022 Pathways of neurodegeneration - multiple diseases
    136119873 (SQSTM1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    136119873 (SQSTM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pphc04131]
    136119873 (SQSTM1)
   03029 Mitochondrial biogenesis [BR:pphc03029]
    136119873 (SQSTM1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pphc04147]
    136119873 (SQSTM1)
Membrane trafficking [BR:pphc04131]
 Autophagy
  Mitophagy
   Cargo receptors
    136119873 (SQSTM1)
  Pexophagy
    136119873 (SQSTM1)
  Aggrephagy
    136119873 (SQSTM1)
  Xenophagy
    136119873 (SQSTM1)
  ER-phagy
   ER-phagy recepters
    136119873 (SQSTM1)
  Other autophagy associated proteins
   Midbophagy
    136119873 (SQSTM1)
Mitochondrial biogenesis [BR:pphc03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    136119873 (SQSTM1)
Exosome [BR:pphc04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   136119873 (SQSTM1)
SSDB
Motif
Pfam: UBA_5 PB1 ZZ
Other DBs
NCBI-GeneID: 136119873
NCBI-ProteinID: XP_065729212
LinkDB
Position
3:complement(155831893..155844285)
AA seq 440 aa
MASLTVKAYLLGKEDAAREIRRFSFCFSPEPEAEAESTAGPRPCERLLSRVAALFPVLRP
GGFQAHYRDEDGDLVAFSSDEELKMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEVPRN
MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGMHREHSKLAFPSPFGRPSEGFS
HSRWLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDAHPGPAAESASGPSEDPSVNFLKNV
GESVAAALSPLGIEVDIDVEHGGKRSRLTPTSPGSSTPEEKCSSQTSSCCSNPSKPDGDV
EGMAQSLVEQVNKIALESGGQPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPE
SEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTK
DYDIGAALDTIQYSKHPPPL
NT seq 1323 nt   +upstreamnt  +downstreamnt
atggcgtcgctcaccgtgaaggcctaccttctgggcaaggaggacgcagcccgcgagatc
cgccgcttcagcttctgttttagcccggagcccgaagcggaagctgagtccacagctggc
ccgcggccctgcgagcggctgctgagccgggtggccgccctgttccccgtactacggccc
ggcggcttccaggctcactaccgcgatgaggacggggacttggttgccttttccagtgac
gaggaactgaagatggcaatgtcatatgtgaaggatgacatcttccgtatttacattaaa
gagaagaaggagtgccggcgggaccaccgacccccgtgtgctcaggaggtgccccgaaac
atggtgcaccccaacgttatctgtgatggttgcaacgggccagtggtggggacccgctac
aagtgcagcgtctgtcctgactacgacctatgctctgtctgtgaggggaagggcatgcac
agggagcacagcaagcttgccttccccagccccttcgggcgcccttctgagggcttctct
cacagccgctggctgcggaagctgaaacacgggcactttgggtggcctggctgggagatg
ggcccaccggggaactggagcccacgtcctcctcgagcgggggatgcccaccctggcccc
gctgcagaatcagcttctggtccatcggaggatcccagtgtgaatttcctcaagaatgta
ggggagagtgtggcagctgccctcagccctctgggcattgaagtcgatattgacgtggaa
catggaggaaagagaagccgcctgacacccacctccccaggcagctccaccccagaggag
aagtgtagctctcagacaagcagctgctgttccaaccccagcaagccagacggggacgtg
gagggcatggcacagtctctggtggagcaagtgaacaagatcgccctggagtcagggggt
cagcctgaggaacagatggagtctgataactgttcaggaggagatgatgactggactcat
ttgtcttcaaaagaggtggacccatctacaggtgaactccagtctttacagatgcctgaa
tctgaagggccaagctctctggacccttcccaggaaggacccacagggctgaaggaagct
gcattgtacccacatttgccaccagaagctgacccccggctgattgagtccctctcccag
atgctatccatggggttctctgatgaaggcggctggctcaccaggctcctacagaccaag
gattatgacatcggggctgccctagacaccatccagtattcaaaacacccaccaccgttg
tga

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