Phocoena phocoena (harbor porpoise): 136119873
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Entry
136119873 CDS
T11058
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1
KO
K14381
sequestosome 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04137
Mitophagy - animal
pphc04140
Autophagy - animal
pphc04217
Necroptosis
pphc04218
Cellular senescence
pphc04380
Osteoclast differentiation
pphc05014
Amyotrophic lateral sclerosis
pphc05022
Pathways of neurodegeneration - multiple diseases
pphc05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136119873 (SQSTM1)
04137 Mitophagy - animal
136119873 (SQSTM1)
09143 Cell growth and death
04217 Necroptosis
136119873 (SQSTM1)
04218 Cellular senescence
136119873 (SQSTM1)
09150 Organismal Systems
09158 Development and regeneration
04380 Osteoclast differentiation
136119873 (SQSTM1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
136119873 (SQSTM1)
05022 Pathways of neurodegeneration - multiple diseases
136119873 (SQSTM1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
136119873 (SQSTM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136119873 (SQSTM1)
03029 Mitochondrial biogenesis [BR:
pphc03029
]
136119873 (SQSTM1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pphc04147
]
136119873 (SQSTM1)
Membrane trafficking [BR:
pphc04131
]
Autophagy
Mitophagy
Cargo receptors
136119873 (SQSTM1)
Pexophagy
136119873 (SQSTM1)
Aggrephagy
136119873 (SQSTM1)
Xenophagy
136119873 (SQSTM1)
ER-phagy
ER-phagy recepters
136119873 (SQSTM1)
Other autophagy associated proteins
Midbophagy
136119873 (SQSTM1)
Mitochondrial biogenesis [BR:
pphc03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
136119873 (SQSTM1)
Exosome [BR:
pphc04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136119873 (SQSTM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA_5
PB1
ZZ
Motif
Other DBs
NCBI-GeneID:
136119873
NCBI-ProteinID:
XP_065729212
LinkDB
All DBs
Position
3:complement(155831893..155844285)
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AA seq
440 aa
AA seq
DB search
MASLTVKAYLLGKEDAAREIRRFSFCFSPEPEAEAESTAGPRPCERLLSRVAALFPVLRP
GGFQAHYRDEDGDLVAFSSDEELKMAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEVPRN
MVHPNVICDGCNGPVVGTRYKCSVCPDYDLCSVCEGKGMHREHSKLAFPSPFGRPSEGFS
HSRWLRKLKHGHFGWPGWEMGPPGNWSPRPPRAGDAHPGPAAESASGPSEDPSVNFLKNV
GESVAAALSPLGIEVDIDVEHGGKRSRLTPTSPGSSTPEEKCSSQTSSCCSNPSKPDGDV
EGMAQSLVEQVNKIALESGGQPEEQMESDNCSGGDDDWTHLSSKEVDPSTGELQSLQMPE
SEGPSSLDPSQEGPTGLKEAALYPHLPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTK
DYDIGAALDTIQYSKHPPPL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgctcaccgtgaaggcctaccttctgggcaaggaggacgcagcccgcgagatc
cgccgcttcagcttctgttttagcccggagcccgaagcggaagctgagtccacagctggc
ccgcggccctgcgagcggctgctgagccgggtggccgccctgttccccgtactacggccc
ggcggcttccaggctcactaccgcgatgaggacggggacttggttgccttttccagtgac
gaggaactgaagatggcaatgtcatatgtgaaggatgacatcttccgtatttacattaaa
gagaagaaggagtgccggcgggaccaccgacccccgtgtgctcaggaggtgccccgaaac
atggtgcaccccaacgttatctgtgatggttgcaacgggccagtggtggggacccgctac
aagtgcagcgtctgtcctgactacgacctatgctctgtctgtgaggggaagggcatgcac
agggagcacagcaagcttgccttccccagccccttcgggcgcccttctgagggcttctct
cacagccgctggctgcggaagctgaaacacgggcactttgggtggcctggctgggagatg
ggcccaccggggaactggagcccacgtcctcctcgagcgggggatgcccaccctggcccc
gctgcagaatcagcttctggtccatcggaggatcccagtgtgaatttcctcaagaatgta
ggggagagtgtggcagctgccctcagccctctgggcattgaagtcgatattgacgtggaa
catggaggaaagagaagccgcctgacacccacctccccaggcagctccaccccagaggag
aagtgtagctctcagacaagcagctgctgttccaaccccagcaagccagacggggacgtg
gagggcatggcacagtctctggtggagcaagtgaacaagatcgccctggagtcagggggt
cagcctgaggaacagatggagtctgataactgttcaggaggagatgatgactggactcat
ttgtcttcaaaagaggtggacccatctacaggtgaactccagtctttacagatgcctgaa
tctgaagggccaagctctctggacccttcccaggaaggacccacagggctgaaggaagct
gcattgtacccacatttgccaccagaagctgacccccggctgattgagtccctctcccag
atgctatccatggggttctctgatgaaggcggctggctcaccaggctcctacagaccaag
gattatgacatcggggctgccctagacaccatccagtattcaaaacacccaccaccgttg
tga
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