Phocoena phocoena (harbor porpoise): 136119909
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Entry
136119909 CDS
T11058
Symbol
SMAD5
Name
(RefSeq) mothers against decapentaplegic homolog 5
KO
K16790
mothers against decapentaplegic homolog 5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04081
Hormone signaling
pphc04350
TGF-beta signaling pathway
pphc04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136119909 (SMAD5)
09133 Signaling molecules and interaction
04081 Hormone signaling
136119909 (SMAD5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
136119909 (SMAD5)
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GFIT
Motif
Pfam:
MH2
MH1
IRF-3
Motif
Other DBs
NCBI-GeneID:
136119909
NCBI-ProteinID:
XP_065729303
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Position
3:114087852..114113651
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AA seq
465 aa
AA seq
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MTSMASLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSSPG
QPSKCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLDICEFPFGSKQKE
VCINPYHYKRVESPVLPPVLVPRHNEFNPQHSLLVQFRNLSHNEPHMPQNATFPDSFHQP
NNTPFPLSPNSPYPPSPASSTYPNSPASSGPGSPFQLPADTPPPAYMPPDDQMGQDNSQP
MDTSNNLIPQIMPSISSRDVQPVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFT
DPSNNKSRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNC
NFHHGFHPTTVCKIPSSCSLKIFNNQEFAQLLAQSVNHGFEAVYELTKMCTIRMSFVKGW
GAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPLNPISSVS
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaatggccagcttgttttcttttactagtccagcagtaaagcgattgttgggc
tggaagcaaggtgatgaagaggagaaatgggcagaaaaggcagtcgatgctttggtgaaa
aagctaaaaaagaaaaagggtgccatggaggaactggagaaagccttgagcagtccagga
cagccaagcaaatgtgtcactattcccagatctttagatggacgcctgcaggtttctcac
agaaaaggcttgccccatgttatatattgtcgtgtttggcgctggcctgatttgcagagt
catcacgagctaaagccattggatatttgtgaatttccttttggatctaagcaaaaggaa
gtttgtatcaacccataccactataagagagtggagagtccagtcttacctccagtatta
gtgcctcgtcataatgaattcaacccacaacacagccttctggttcagtttagaaactta
agccacaatgaacctcacatgccacaaaatgcaacgtttccagattctttccatcagccc
aacaacactccttttcccttatctccaaatagtccctaccctccttcccctgctagcagc
acatatcccaactccccagcaagttctggaccaggaagtccatttcagctcccagctgat
actcctcctcctgcatatatgccaccagatgatcagatgggtcaagataattcccagccc
atggatacaagcaataatttgattcctcagattatgcccagcatatccagcagagatgtt
cagcctgttgcctatgaagagcccaaacattggtgttcaattgtctactatgaattaaac
aatcgtgttggggaagcttttcatgcatcttctactagtgtgttagtagatggattcaca
gacccttcaaataacaaaagtagattctgcttgggattgttgtcaaatgttaatcgtaat
tcaacaattgaaaacaccaggcgacatattggaaaaggtgttcatctgtactatgttggt
ggagaggtgtatgcagagtgcctcagtgacagcagcatatttgtacagagtaggaactgc
aactttcatcatggctttcatcctaccactgtctgtaagattcccagcagctgcagcctc
aaaatttttaacaatcaggagtttgcccagcttctggctcagtcagtcaaccatggattt
gaggcagtatatgagcttaccaaaatgtgtaccattcgaatgagttttgtcaagggctgg
ggagcagaatatcaccggcaagatgttaccagcaccccatgttggattgagattcatctt
catgggcctcttcagtggctggataaagtcctcactcagatgggctcccctctaaacccc
atttcttctgtttcatag
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