Phocoena phocoena (harbor porpoise): 136120005
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Entry
136120005 CDS
T11058
Symbol
PSEN2
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04330
Notch signaling pathway
pphc04722
Neurotrophin signaling pathway
pphc05010
Alzheimer disease
pphc05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
136120005 (PSEN2)
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
136120005 (PSEN2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
136120005 (PSEN2)
05022 Pathways of neurodegeneration - multiple diseases
136120005 (PSEN2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pphc01002
]
136120005 (PSEN2)
Peptidases and inhibitors [BR:
pphc01002
]
Aspartic peptidases
Family A22: presenilin family
136120005 (PSEN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
Tmemb_55A
Motif
Other DBs
NCBI-GeneID:
136120005
NCBI-ProteinID:
XP_065729486
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All DBs
Position
1:complement(163229462..163246090)
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AA seq
448 aa
AA seq
DB search
MLTFMASDSEEEVCDERTSLMSAESPMPRSCQEGRQGLENGEGAAQWRGQESEEDHEEDP
DRYVCSGVPGRPPGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLI
YTPFTEDTPSVGQRFLNSVLNTLIMISVIVVMTIFLVVLYKYRCYKFIHGWLIMSSLMLL
FLFTYIYLGEVLKTYNVAMDYPTLFLTVWNFGAVGMVCIHWKGPLVLQQAYLIMISALMA
LVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQERNEPIFPALIYSSAMVW
TVGMAKLDPSSQGALQLPYDPEMEEDSCDSLGEPSYPEVFAPPLPGYPGEELEEEEERGV
KLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLCLTLLLLAVFKKALPALPISI
TFGLIFYFSTDNLVRPFMDTLASHQLCI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgctcacattcatggcctctgacagcgaggaagaagtgtgtgacgagcggacgtccctg
atgtcagccgagagccccatgccgcgctcctgccaggaaggcaggcagggcctggagaat
ggagagggtgccgcccagtggagaggccaggagagcgaggaggaccatgaggaggaccct
gaccgctacgtctgcagcggggtccccgggcggccaccaggcctggaggaggagctgacc
ctcaaatatggggcaaagcatgtgatcatgctatttgtgcccgtcacgctgtgcatgatc
gtggtggtggccaccatcaagtccgtgcgcttctacacggagaagaatggacagctcatc
tacacacctttcacggaggacacaccttcggtgggccagcgcttcctcaactccgtgctc
aacaccctcatcatgatcagcgtcattgtcgtcatgaccatcttcctggtcgtgctctac
aagtaccgctgctacaagttcatccacggctggctgatcatgtcctccctgatgctgctg
ttccttttcacctacatctaccttggggaagtgctcaagacctacaatgtggccatggac
taccccaccctgttcctgaccgtctggaacttcggggcggtgggcatggtgtgcatccac
tggaagggccccttggtgctgcagcaggcctatctcatcatgatcagcgcgctcatggcc
ttggtgttcatcaagtacctcccagagtggtctgcgtgggtcatcctgggcgccatctca
gtgtatgatctcgtggctgtgctgtgccccaaagggccactgagaatgctggtagaaact
gcccaggagagaaacgagcccatatttcctgccctgatatattcatccgccatggtgtgg
acggtgggcatggccaagttggacccctcctctcagggagcccttcagctcccctacgac
ccagagatggaagaggactcctgtgacagtttgggggagccctcgtaccctgaagtcttt
gcgccccccctgcctggctacccgggggaggagctggaggaggaggaggaaaggggcgtg
aagctcggcctcggagacttcatcttctacagcgtgctggtgggcaaggcggcagccacg
ggcagtggggactggaacaccacgctggcctgctttgtggccatcctcatcggtttgtgt
ctgaccctcctgctgctcgccgtgttcaagaaagcgttgcccgccctccccatctccatc
acgttcgggctgatcttctacttctccacagacaacctggtacggcctttcatggacacc
ctggcctcccatcagctctgcatctga
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