Phocoena phocoena (harbor porpoise): 136127507
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Entry
136127507 CDS
T11058
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136127507 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136127507 (KDM2A)
04121 Ubiquitin system [BR:
pphc04121
]
136127507 (KDM2A)
03036 Chromosome and associated proteins [BR:
pphc03036
]
136127507 (KDM2A)
Enzymes [BR:
pphc01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
136127507 (KDM2A)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
136127507 (KDM2A)
Ubiquitin system [BR:
pphc04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
136127507 (KDM2A)
Chromosome and associated proteins [BR:
pphc03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
136127507 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
136127507 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
136127507
NCBI-ProteinID:
XP_065739129
LinkDB
All DBs
Position
8:104474060..104577717
Genome browser
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGR
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSSRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSGDSSSDSSRGSHNGQVWDPQCSPRKDRQVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCVCNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDSSEKTQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPASPRGVVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagattgcgtggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaaggaaaaagaacttttgacttg
gaagagaaactccacaccaacaaatataatgcaaattttgttacttttatggaaggaaga
gattttaatgtagagtatatccagcggggtggcttaagagatcctctgattttcaagaac
tccgatggacttggaataaagatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcggatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagaccccagaggaggagcgagaaaaactc
tataatgtcatcagcctagagtttagccacaccaggctggagaatatggtgcagcggccc
tccacggtggatttcattgactgggtagacaatatgtggccaaggcatttaaaagaaagt
cagactgagtcaacaaatgccatcttggagatgcagtaccctaaagtgcagaagtactgt
ctgatgagtgttcgaggctgctatactgacttccatgtggactttggtggtacctctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagacacattagtgtttggaggcaattttttg
catagcttcaatatccccatgcagttaaaaatatacaacattgaagatcggacacgggtt
ccaaataagttccgctatccattctactatgagatgtgttggtacgtgttggagcgctat
gtgtactgcataaccaaccgttcccacttaactaaggaatttcagaaagagtcccttagc
atggatttggagttaaatgggttggagtctggaaatggggatgaggaagcagtagatcga
gaaccccggcgcttgagcagcaggcgttctgtcctcactagccctgtagccaatggggtt
aacctggattatgatggactgggcaaaacctgccgaagtcttccaagtctgaagaaaact
ttgtctggggactcatcctctgactctagccggggctcccacaatggccaagtatgggat
ccccagtgtagccccagaaaggaccgacaggtgcatctgacccattttgagcttgaaggc
cttcgttgccttgtagataaattggagtctctgccactgcacaagaaatgtgtccctaca
gggatagaagacgaagatgctctcattgctgatgtaaagattttgctggaggagcttgcc
aacagtgatcccaagttagccctcactggagtccctattgtacagtggccgaaaagggat
aagcttaaattcccgacccggccaaaggtgcgggttcctaccatccccatcacaaagcct
cacactatgaaaccagctccacggttaacacctgtgaggccagctgctgcctcccccata
gtgtcaggagccaggcggagacgagtgcgatgtcgaaaatgcaaagcctgtgtgcaagga
gagtgtggtgtctgccactactgcagggacatgaagaagtttgggggccctggtcgcatg
aagcagtcctgtgttctccggcagtgcttggcgcccagactgcctcactcagtcacgtgt
tccctctgtggagaggtggatcaaaatgaggagacacaggactttgagaagaaactcatg
gaatgctgtgtctgcaacgagattgttcatcctggctgcctccagatggatggagagggt
ttgcttaacgaggaattgccaaattgctgggagtgtccaaagtgctaccaggaggacagc
tcagagaaaacccagaagcggaaaatggaagagagcgacgaagaagccgtgcaagccaaa
gtcctgcggcccctgcggagctgcgacgagcccctcacgcccccacctcactcgcccacc
tccatgctgcagctcatccacgacccggcctccccccggggcgtggtgactcgttcatcc
cctggggccggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcgg
cagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctacagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccattccccccgtgtgctagtgcagcactgc
ccagcccgaaccccccagcgtggggatgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaaggct
attgtaccccaggctctcagtggcatcatcaagaggcagccagttagcctcgacctcagt
tggaccaacatctccaaaaaacaactgacgtggctcgtcaataggctgccaggactgaaa
gacctcctcctggcaggctgctcctggtctgcagtctctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgactccaccggctgataaaccaggtcaggacaatcgcagcaagctccggaac
atgactgacttccggctggcgggccttgacatcacagatgccacgcttcgcctcatcatt
cgccacatgcccctcctgtctcgactcgacctcagtcactgcagccacctgacagatcag
tcctccaatctactcaccgctgttgggtcttccactcgttactccctcacagagctcaac
atggcaggttgcaataaattgacagaccagaccctgatctacctacggcgcatcgccaat
gtcaccttgatcgaccttcgaggatgcaagcagatcacccgaaaagcctgcgagcacttc
atctcagacttgtccatcaacagtctctactgcctgtctgacgagaagctgatacagaag
atcagctaa
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