Phocoena phocoena (harbor porpoise): 136127845
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Entry
136127845 CDS
T11058
Symbol
IRF5
Name
(RefSeq) interferon regulatory factor 5 isoform X1
KO
K09446
interferon regulatory factor 5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
136127845 (IRF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136127845 (IRF5)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
136127845 (IRF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
136127845
NCBI-ProteinID:
XP_065739562
LinkDB
All DBs
Position
9:82876056..82881246
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AA seq
503 aa
AA seq
DB search
MNQPAPAALPPPRRVRLKPWLVAQVNSCQYPGLQWVNGEKKCFYIPWRHATRHGPSQDGD
NTIFKAWAKETGKYTEGVDEADPAKWKANLRCALNKSRDFRLIYDGPRDMPPQPYKIYEV
CSNGPTPAESQPSEDYTPGTGEEEEEEEEELQRMLPSLSLTEAVQPGPPMAPYSLSKEDV
KWPPTLQPPVVLGPPAPDPSLLGPAPGNPADYGELLSEVLPSPQPGTLAASLPPTGEQLL
PDLLISPHMLPLTDLEIKFQYRGRPPRALTISNPHGCRLFYSQLEATQEQVELFGPVSLE
QVRFPSPEDIPSDKQRFYTNQLLDVLDRGLILQLQGQDLYAIRLCQCKVFWSGPCASAHG
SHPNPIQREVKTKLFSLEHFLNELILFQKGQTNTPPPFEIFFCFGEEWPDRKPREKLLIT
VQVVPVAARLLLEMFSGELSWSADSIRLQISNPDLKDRMVEQFKELHHIWQSQQQLQPVA
QAPPVAGLSAGQGPWPMHPVGMQ
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagcctgcccccgctgcccttcctccgccccgccgcgtacggctgaagccctgg
ctggtggcccaggtgaacagctgccagtacccggggcttcagtgggtcaatggggaaaag
aaatgcttctatatcccctggcgccatgccacgcggcacggccccagccaggatggagat
aacaccatcttcaaggcctgggccaaggagacaggaaagtacaccgagggggtggacgag
gccgatccggccaagtggaaggccaacctgcgctgtgcccttaacaagagccgtgacttt
cgcctcatctatgatgggccccgggacatgccgcctcagccctacaagatctatgaggtc
tgctccaatggccccactcctgcagagtcacagcccagtgaggattacactcccggtaca
ggagaggaggaggaggaggaagaggaagagctccagaggatgttaccaagcctgagcctc
acagaagcagtgcagcccggtccccccatggcaccctattctttatccaaagaggatgtc
aagtggccacccactctccagccgcctgtggtgctgggtccccctgctccagaccccagc
ctcctgggccctgcccctggcaaccctgctgactatggggagctgctttctgaggtcctg
ccaagcccacagcctgggaccctggctgccagcctgccccccacaggcgaacaactcctg
cccgacctgctgatcagccctcacatgctgcctctgaccgacctggagatcaagttccag
taccgggggaggccaccccgggccctcaccatcagcaacccccatggctgccggctcttc
tacagccagctggaggccacccaggagcaggtggagctctttggccctgtgagcctagaa
caagtgcgcttccccagccccgaggacatccccagcgacaagcagcgcttttataccaac
cagctgctggatgtcctggaccgcgggctcatcctccagctacaaggccaggatctgtat
gccatccgcctgtgccagtgcaaggtgttctggagcgggccctgcgcctcagcccatggc
tcgcaccccaaccccatccagcgggaggtcaagaccaagctcttcagcctggagcatttt
ctcaatgagctcatcctgttccagaagggccagaccaacaccccaccaccgtttgagatc
ttcttctgctttggggaggagtggcctgatcgcaaaccccgagagaagctgctcatcact
gtacaggtggtgcctgtagcagctcggctgctgctggagatgttctcaggggagctttct
tggtcggctgatagcatccggctacagatctcaaacccagacctcaaagaccgcatggta
gaacagttcaaggagctccatcacatctggcagtcccagcagcagctgcagcctgtggcc
caagcccctcctgtggcaggcctcagtgctggccaggggccctggcccatgcacccggtc
ggcatgcagtaa
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