Phocoena phocoena (harbor porpoise): 136128212
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Entry
136128212 CDS
T11058
Symbol
RAPGEF5
Name
(RefSeq) rap guanine nucleotide exchange factor 5
KO
K08019
Rap guanine nucleotide exchange factor 5
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04014
Ras signaling pathway
pphc04015
Rap1 signaling pathway
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
136128212 (RAPGEF5)
04015 Rap1 signaling pathway
136128212 (RAPGEF5)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
DEP
RasGEF_N
RA
DUF6382
RA_2
Ald_Xan_dh_C
SNX17-27-31_F1_FERM
Motif
Other DBs
NCBI-GeneID:
136128212
NCBI-ProteinID:
XP_065740055
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Position
9:31525717..31741049
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AA seq
883 aa
AA seq
DB search
MRMAVGSVKMQPPCESPALAAAAAVAAADGAFRRSPSAREPEREPLQLPPRPRLRDLPAL
LRSGLTLRRKRSAAGGRTLSRRISNPYLEPTPSQIYGENSSCAGRALRNIIIVQAADLIK
DRVNLKGFYRRSCVGSELVDWLLEHCPLVQCRSMAIGVWQLLLDMGIMSSVDQHLCFQDT
YVFYQFSSDECSYLYCEFEREEAWQNGVKLLLQLVPLIPTRAGICELSHQKIEDSEESSD
EILCRLTSAVQRELAAVIALKARKSAIEQDEENSDKHVTVTEAEGVADPQAGVICKLQER
DDIGRIELVQKLARENCQFLQTDKKEQEKSEHQDDEVTTVQVKEQDRDVLVLKKVQSCGP
APQAGSSESDWRYVVVSGTPEKILEHLLNDLHLEEVQDKETETLLDDFLLTYTVFMTTDD
LCQALLRHYSAKKYQGKEENSDVPCRKRKVLHLVSQWIALYKDWLHEDEHSKMFLKTIYR
NVLDDVYEYPILEKELKEFQKILGMHRRHTVDEYSPQRKNKALFHQFSLKENWLQHRGTV
TETEEIFCHVYITEHSYVSVKAKVSSTAQEILRVVAEKIQHAEEDLALVAVTFSGEKHEL
QPNDLAISKSLEASGRIYVYRKDLADTLNPFAENEESQQRSIRILGMNTWDIALELMNFD
WSLFNSIHEQELIYFTFSRQGSGDHTVNLSLLLQRCNEVQLWVATEILLCSQLGKRVQLV
KKFIKIAAHCKAQRNLNSFFAIVMGLNTASVSRLSQTWEKIPGKFKKLFSELESLTDPSL
NHKAYRDAFKKMKPPKIPFMPLLLKDVTFIHEGNKTFLDNLVNFEKLHMIADTVRTLRHC
RTNQFGDISPKEHPELKSYVHHLCVIDSQQALFALSHRIEPRV
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgaggatggccgtgggctccgtcaagatgcagccgccgtgcgagagtccggccctggcc
gcggcggcggcggtggcggcggcggacggcgcctttcgccgcagccccagcgcccgcgag
ccggagcgcgagccgctgcagttgccgccgcggccgcggctgcgggacctgcccgcgctg
ctgcggagcggcctcactctgcggaggaagcgcagcgccgccgggggccggactctatca
agaagaatttccaatccataccttgaacctactccttcccagatttatggagagaattct
tcttgtgcaggaagagcactgaggaatattatcatcgttcaggcagctgacctgataaag
gacagggtgaacctcaagggattttacaggagaagctgcgttgggtcggaactggtagac
tggcttctagaacactgtcctttggtccaatgcagatctatggccataggggtctggcag
ctcctgctggatatgggaattatgtcatcagtggaccagcatttatgctttcaagatacc
tatgttttctaccagttttcgtctgatgagtgtagctacttgtactgtgaatttgaaaga
gaagaggcgtggcaaaacggtgtcaaacttttactgcagctggtgcctctcattcccact
agagctggcatctgtgaactatctcatcagaaaattgaagactcagaagagagcagcgat
gaaattctttgtcgtctaacgtctgcggtgcagagagagctagcagctgttattgctttg
aaagcaaggaagtctgcaattgaacaagatgaagaaaacagtgacaaacacgtaaccgtg
acagaggctgaaggtgttgcagaccctcaggctggggtgatatgcaaacttcaggagaga
gatgatatcgggcgaattgaactggtccagaagctggcaagagaaaactgtcaatttttg
cagacggacaaaaaagaacaggagaagtctgaacatcaggatgatgaagtgacaaccgtt
caggttaaagagcaagaccgggacgtcctggtgctgaagaaagtgcagagctgcggccca
gccccccaggcggggagctcagagagtgattggagatacgtggtcgtgtccgggaccccg
gagaagatcttggagcaccttttgaatgacttgcacctggaagaagtccaggacaaagaa
acagagaccctccttgatgacttccttctcacgtacacggtcttcatgacaactgacgac
ttgtgccaggcgctgttgaggcactattctgctaagaagtatcaaggcaaagaagaaaac
tcagatgttccttgtcggaaacggaaggtcttgcatcttgtttcccagtggattgctctg
tacaaagactggttacatgaagatgaacattcaaaaatgtttttaaagaccatatacaga
aatgtactggatgatgtatatgaatacccaatacttgaaaaagaactgaaagaatttcaa
aagatacttggaatgcaccgtcgtcacactgtagatgaatattcaccacaaaggaagaat
aaagcccttttccaccaattcagtcttaaggagaactggctccagcatagaggaactgtg
acggaaacagaggaaattttctgtcacgtgtatatcacggagcactcctatgtcagcgtg
aaggcaaaagtttccagtacagcccaagagatcctgagagttgtggcggaaaagatccag
catgcggaagaggatctggctctggtagccgtcacattctctggggaaaagcatgaactt
cagccaaatgacttggccatctccaaatcccttgaagcatctggtcggatatatgtctac
cggaaagacctggctgacactttgaatccttttgcagaaaatgaagaatcacagcaaagg
tcgattaggattttgggaatgaacacttgggatattgctctggaattaatgaattttgat
tggagcctcttcaattcaattcacgagcaagagctgatctacttcacgttcagcagacaa
ggaagtggggaccacacagtgaacctgagcctcctactccagagatgcaatgaggtccag
ctctgggtagccacggagattctgctctgcagccaactgggcaagagagtgcagctggtg
aaaaaattcatcaaaattgctgctcactgcaaagcccagagaaacctgaattctttcttt
gctattgtgatgggtctcaacactgcttctgtcagccggctgtcccagacctgggagaaa
atccctgggaagtttaagaaacttttttctgaacttgaaagtttaacagatccttccctg
aatcacaaagcctaccgagatgcattcaaaaagatgaagccgcccaaaatccctttcatg
cccttgttgcttaaagatgtaacattcattcatgaaggaaataaaacatttttggataat
cttgtcaattttgaaaaactgcatatgattgcagacactgtccgaacactgagacactgc
aggactaaccagtttggtgacatatctccaaaagagcacccagagttaaaatcctacgtt
catcacctgtgcgtcattgacagccagcaggccctgtttgcgctgtcgcacaggatcgag
ccacgggtgtga
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