KEGG   Phocoena phocoena (harbor porpoise): 136130874
Entry
136130874         CDS       T11058                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
pphc  Phocoena phocoena (harbor porpoise)
Pathway
pphc03420  Nucleotide excision repair
pphc04066  HIF-1 signaling pathway
pphc04110  Cell cycle
pphc04114  Oocyte meiosis
pphc04120  Ubiquitin mediated proteolysis
pphc04141  Protein processing in endoplasmic reticulum
pphc04310  Wnt signaling pathway
pphc04350  TGF-beta signaling pathway
pphc04710  Circadian rhythm
pphc05170  Human immunodeficiency virus 1 infection
pphc05200  Pathways in cancer
pphc05211  Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:pphc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    136130874 (RBX1)
   04120 Ubiquitin mediated proteolysis
    136130874 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    136130874 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    136130874 (RBX1)
   04350 TGF-beta signaling pathway
    136130874 (RBX1)
   04066 HIF-1 signaling pathway
    136130874 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    136130874 (RBX1)
   04114 Oocyte meiosis
    136130874 (RBX1)
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    136130874 (RBX1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    136130874 (RBX1)
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    136130874 (RBX1)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    136130874 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pphc04121]
    136130874 (RBX1)
   03400 DNA repair and recombination proteins [BR:pphc03400]
    136130874 (RBX1)
Enzymes [BR:pphc01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     136130874 (RBX1)
Ubiquitin system [BR:pphc04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   136130874 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     136130874 (RBX1)
   Cul2 complex
     136130874 (RBX1)
   Cul3 complex
     136130874 (RBX1)
   Cul4 complex
     136130874 (RBX1)
   Cul7 complex
     136130874 (RBX1)
   Cul8 complex
     136130874 (RBX1)
   Cul9 complex
     136130874 (RBX1)
DNA repair and recombination proteins [BR:pphc03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      136130874 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      136130874 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 zf-RING_16
Other DBs
NCBI-GeneID: 136130874
NCBI-ProteinID: XP_065743580
LinkDB
Position
11:complement(7859174..7872441)
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggcagcgatggatgtggataccccgagcggcacgaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcggtagccctctgggcctgggatattgtggttgat
aactgtgccatctgccggaaccacattatggatctttgcatagagtgtcaagccaaccag
gcgtctgctacttctgaagagtgcaccgttgcgtggggagtctgtaaccatgcttttcac
ttccactgcatctcccgctggctcaaaacacggcaggtgtgtccgttggacaacagagag
tgggaattccaaaagtatgggcactag

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