Phocoena phocoena (harbor porpoise): 136131492
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Entry
136131492 CDS
T11058
Symbol
NR1H4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
136131492 (NR1H4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136131492 (NR1H4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pphc03310
]
136131492 (NR1H4)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
136131492 (NR1H4)
Nuclear receptors [BR:
pphc03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
136131492 (NR1H4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
136131492
NCBI-ProteinID:
XP_065744314
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Position
11:complement(21080427..21129283)
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AA seq
486 aa
AA seq
DB search
MVMQFPELENPGQISPCHSCTSLGFAMEMMSMKPAKGVLTEQAAGPLGQNLEVEPYSQYN
NIQFPQVQPQISSSSYYSNLGFYPQQPEEWYSPGVYELRRMPAETLYQGETEVVEIPVTK
KARLGTSAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCV
MDMYMRRKCQECRLRKCKEMGMLAECMYTGLLTDIQCKSKRLRKNVKQHADQTINEDSEG
RDLRQVTSTTKSCREKTELTPDQQNLLHYIMDSYSKQRMPQEITNKILKEEFSAEENFLI
LTEMATSHVQILVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFSKKLPAGHAD
LLEERIRKSGISDEYITPMFSFYKSVAELKMTQEEYALLTAIVILSPDRQYIKDREAVEK
LQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLC
EIWDVQ
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgcagtttccggagttagaaaatccaggtcaaattagtccttgtcacagctgc
acgtcgttgggatttgccatggaaatgatgagcatgaagcctgctaaaggtgtactaaca
gaacaagcagcaggtcctctgggacagaatctagaagtggaaccatactcacaatacaac
aacattcagtttccccaagttcaaccacagatttcctcatcttcctattactccaacctg
ggtttctatccccagcagcctgaagagtggtactctcctggagtatatgaactcaggcga
atgcctgctgagactctctaccagggagagactgaggtagtggagattcctgtgacaaag
aaggcccgactgggtacatcagcagggagaataaaaggagatgagctatgtgttgtttgt
ggagacagagcatccggttaccactataatgcactgacctgtgaggggtgcaaaggtttc
ttcaggagaagcattaccaaaaatgccgtgtacaagtgtaaaaacgggggcaactgtgtg
atggacatgtacatgcgaaggaagtgccaagagtgtcgactaaggaaatgcaaagagatg
ggaatgttggctgaatgtatgtatacaggcttgttaactgacattcagtgcaaatctaaa
agactgaggaaaaacgtgaagcagcacgcagatcagaccattaatgaagacagtgaagga
cgtgatttgcgacaagtgacctcgacaactaagtcatgcagggagaaaactgaactcacc
ccagatcaacagaatcttcttcattatattatggattcatacagcaagcagaggatgcct
caggaaataacaaataaaattttaaaagaagaattcagtgcagaagaaaattttctcatt
ttaactgaaatggctaccagtcatgtacagattctcgtagaattcacaaaaaaacttcca
gggtttcagacattggaccatgaagatcagattgctttgctgaaagggtctgcagttgaa
gctatgtttctccgttcagctgagattttcagtaagaaacttccagctggacatgctgac
ctattggaagagagaattcgaaagagcggtatctctgatgaatatataacacctatgttt
agcttttataaaagtgttgcagaattgaaaatgactcaagaagagtatgctctgcttaca
gcaattgttattctctctccagacagacaatacataaaggacagagaggcagtagagaag
cttcaggaaccactgcttgatgtgctacaaaagttgtgtaagattcatcagcctgaaaat
cctcaacattttgcctgtcttctgggtcgcctgactgagttgcggacattcaaccatcac
cacgcagagatgcttatgtcatggagagtgaacgaccacaagtttaccccgcttctctgt
gaaatctgggatgtgcagtga
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