Phocoena phocoena (harbor porpoise): 136134648
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Entry
136134648 CDS
T11058
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe isoform X1
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc00514
Other types of O-glycan biosynthesis
pphc04330
Notch signaling pathway
pphc05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
136134648 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
136134648 (LFNG)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
136134648 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pphc01003
]
136134648 (LFNG)
Enzymes [BR:
pphc01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
136134648 (LFNG)
Glycosyltransferases [BR:
pphc01003
]
Glycan extension
O-Glycan
136134648 (LFNG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
DUF2785
DUF6895
Motif
Other DBs
NCBI-GeneID:
136134648
NCBI-ProteinID:
XP_065748384
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Position
15:1736452..1744671
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AA seq
378 aa
AA seq
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MLKRCGRRLLLALAGALLACLLVLTADPPPPPVPAERGRRALRSLAGPSGAAPAPGLEAA
AAPGVLVREVHSLSEYFSLLTRSRRDAGPPPGSVPRPADGHPRPPAEPLTPHDVFIAVKT
TKKFHRARLDLLLETWISRHKEMTYIFTDGEDEALARRTGNVVNTNCSAAHSRQALSCKM
AVEYDRFVESGRKWFCHVDDDNYVNVRALLKLLASYPHTQDIYLGKPSLDRPIQATERVS
ESKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMSTAERIRLPDDCTIGYIVEALL
GVPLIRSGLFHSHLENLQQVPASELHEQVTLSYGMFENKRNAVHIKGPFSVEADPSRFRS
IHCHLYPDTPWCPHTAIF
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcgctgcggccgtcgcctgctgctggcgctggcgggcgcgctgctcgcctgc
ctgttggtgctcacggccgacccgccgccgcccccagtgcccgctgagcgcggtcggcgc
gcgctgcgcagcctggcgggcccctcgggggcggccccagctcctgggctggaggcggcg
gcggcacccggggtgctagtccgcgaggtgcacagtctgtccgagtacttcagcctgctg
acccgctctcgtagagacgcgggcccaccgcccggcagcgtcccccgccccgcagacggc
catccgcggcccccggccgagccactcacgccgcacgacgtcttcatcgcggtcaagacc
accaaaaagtttcaccgcgcgcgcctcgacttgctgctggagacgtggatctcgcgccac
aaggagatgacgtacattttcacggacggggaagatgaagccctggccaggcgcacgggc
aacgtggtcaatactaactgctcggctgcccacagccgccaggcactgtcgtgcaagatg
gccgtggagtatgaccgcttcgtcgaatcggggaggaagtggttctgccacgtggatgat
gataactacgtgaacgtgcgggccttgctgaagctgctggccagctacccgcacacgcag
gacatctacctcggcaagcccagcctggacaggcccatccaggccacagagagggtcagc
gagagcaaggtgcggcccgtccacttctggtttgccaccggcggggctggcttctgcatc
agccgggggctggccctgaagatgagcccttgggccagcggaggccacttcatgagcacg
gccgagcggatccggctgccggacgactgcaccatcggctacatcgtggaggctctgctg
ggcgtgcccctcatccgcagcgggctcttccactcccacctggagaacctgcagcaggtc
cccgcctccgagctccacgagcaggtgaccttgagctacggcatgtttgaaaacaagcgg
aatgctgtccacattaaggggcccttctcagtggaggccgacccatccaggttccgctcc
atccactgccacctgtatccggacacaccctggtgtccccacactgccatcttctag
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