Phocoena phocoena (harbor porpoise): 136136223
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Entry
136136223 CDS
T11058
Symbol
LGI1
Name
(RefSeq) leucine-rich glioma-inactivated protein 1 isoform X1
KO
K25428
leucine-rich repeat LGI family member 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
136136223 (LGI1)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRRCT
LRR_9
LRR_14
DUF7448
VWC2L_1st
Motif
Other DBs
NCBI-GeneID:
136136223
NCBI-ProteinID:
XP_065750323
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Position
16:complement(32999847..33033191)
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AA seq
617 aa
AA seq
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MQVRSLLEQLDPSHLAAPHRSLPRAVHRWSEEQLTNQLQVPVLKSRETEAEEKGGLLCDL
VLKQDNHHLNSRSPVHVWGYFFDCMESERSQRMGNACNPLKRIAYCLCLLSALLLTEGKK
PAKPKCPAVCTCTKDNALCENARSIPRTVPPDVISLLFTSNSFDVISDDAFIGLPHLEYL
FIENNNIKSISRHTFRGLKSLIHLSLANNNLQTLPKDIFKGLDSLTNVDLRGNSFNCDCK
LKWLVEWLGHTNATVEDIYCEGPPEYKKRKINSLSSKDFDCIITEFAKSQDLPFQSLSID
TFSYMNDEYVVIAQPFTGKCIFLEWDHVEKTFRNYDNITGTSTVVCKPIVIETQLYVIVA
QLFGGSHIYKRDSFANKFIKIQDIEILKIRKPNDIETFKIENNWYFVVADSSKAGFTTIY
KWNGNGFYSHQSLHAWYRDTDVEYLEIARTPQTLRTPHLILSSSSQRPVIYQWNKAIQLF
TNQTDIPNMEDVYAVKHFSVKGDVYICLTRFIGDSKVMKWGGSSFQDIQRMPSRGSMVFQ
PLQINNYQYAILGSDYSFTQVYNWDAEKAKFVKFQELNVQAPRSFTHVSINKRNFLFASS
FKGNTQIYKHVIVDLSA
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtccgctctctcctcgagcagttggatccctcccatctcgcagcacctcacagg
tctcttcctcgagcagtgcatcgctggagcgaggagcagctcacgaatcagctgcaggtt
cctgttttgaaaagcagagagacagaggcagaggaaaagggtggactcttatgtgacctg
gtcttaaagcaagacaatcaccatctgaattccagaagccctgttcatgtttggggatat
tttttcgactgcatggaatcagagagaagccaaaggatgggaaatgcctgcaaccccctg
aaaagaattgcttattgcctatgtctcttatctgcgcttttgctgactgaggggaagaaa
ccagcgaagccaaaatgccctgccgtgtgtacttgtaccaaagataatgctttatgtgag
aatgccagatccattccacgcaccgttcctcctgacgttatctcattgttattcacatcg
aactcatttgatgtgatcagtgatgatgcttttattggtctcccacatctagagtattta
ttcatagaaaacaacaacatcaagtccatttcaagacatactttccggggactaaagtct
ttaattcacctgagccttgcaaacaacaacctccagactctcccaaaagacattttcaaa
ggcctggattctttaacaaatgtggacctgagaggtaattcatttaattgtgactgtaaa
ctgaagtggctggtggaatggctaggccacaccaatgcaactgtcgaagacatctactgt
gaaggccctccagaatacaagaagcgcaaaatcaatagtctctcctccaaggattttgat
tgcatcattacagagtttgcaaagtctcaagacctgccttttcaatcactgtccatagac
actttttcttacatgaacgatgagtatgtagtcatcgctcagcctttcactggaaagtgc
attttccttgaatgggaccacgtagaaaagaccttccggaattatgacaacattacaggc
acgtccactgtagtgtgcaagcctatagtcattgaaactcagctctatgttattgtggcc
cagctgttcggtggctctcacatctataagagagacagttttgcaaataaattcataaaa
atccaggatattgaaattctcaaaatccgaaaacccaatgacattgaaacgttcaagatt
gaaaacaactggtactttgtggttgctgacagttcaaaagctggttttactaccatttat
aaatggaacggaaatggattctactcccatcaatctttacatgcgtggtacagggatact
gatgtggaatatctagaaatagccagaacacctcagacactcagaacgcctcatttaatc
ctgtccagtagttcccagcgtcctgtaatttatcagtggaacaaagcaatacaattattt
actaaccaaaccgacattcctaacatggaagatgtatatgccgttaagcacttctcagtg
aaaggtgacgtgtacatttgcttgacaagattcattggtgattccaaagtaatgaaatgg
ggaggctcctcatttcaggatattcagaggatgccatcgcgaggatccatggtgttccag
cctcttcagataaataactatcaatacgcaattcttggaagtgattattcctttactcaa
gtgtataactgggatgcagagaaagccaaatttgtaaaatttcaggaattgaatgttcag
gcaccaagatcattcacgcatgtgtccattaataagcgtaattttctttttgcttccagt
tttaagggaaacacacagatttacaaacatgtcatagttgacttaagcgcatga
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