Phocoena phocoena (harbor porpoise): 136137435
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Entry
136137435 CDS
T11058
Symbol
RB1
Name
(RefSeq) retinoblastoma-associated protein isoform X1
KO
K06618
retinoblastoma-associated protein
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc01522
Endocrine resistance
pphc04110
Cell cycle
pphc04218
Cellular senescence
pphc04934
Cushing syndrome
pphc05160
Hepatitis C
pphc05161
Hepatitis B
pphc05163
Human cytomegalovirus infection
pphc05165
Human papillomavirus infection
pphc05166
Human T-cell leukemia virus 1 infection
pphc05167
Kaposi sarcoma-associated herpesvirus infection
pphc05169
Epstein-Barr virus infection
pphc05200
Pathways in cancer
pphc05203
Viral carcinogenesis
pphc05207
Chemical carcinogenesis - receptor activation
pphc05212
Pancreatic cancer
pphc05214
Glioma
pphc05215
Prostate cancer
pphc05218
Melanoma
pphc05219
Bladder cancer
pphc05220
Chronic myeloid leukemia
pphc05222
Small cell lung cancer
pphc05223
Non-small cell lung cancer
pphc05224
Breast cancer
pphc05225
Hepatocellular carcinoma
pphc05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
136137435 (RB1)
04218 Cellular senescence
136137435 (RB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
136137435 (RB1)
05207 Chemical carcinogenesis - receptor activation
136137435 (RB1)
05203 Viral carcinogenesis
136137435 (RB1)
09162 Cancer: specific types
05212 Pancreatic cancer
136137435 (RB1)
05225 Hepatocellular carcinoma
136137435 (RB1)
05226 Gastric cancer
136137435 (RB1)
05214 Glioma
136137435 (RB1)
05220 Chronic myeloid leukemia
136137435 (RB1)
05218 Melanoma
136137435 (RB1)
05219 Bladder cancer
136137435 (RB1)
05215 Prostate cancer
136137435 (RB1)
05224 Breast cancer
136137435 (RB1)
05222 Small cell lung cancer
136137435 (RB1)
05223 Non-small cell lung cancer
136137435 (RB1)
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
136137435 (RB1)
05161 Hepatitis B
136137435 (RB1)
05160 Hepatitis C
136137435 (RB1)
05163 Human cytomegalovirus infection
136137435 (RB1)
05167 Kaposi sarcoma-associated herpesvirus infection
136137435 (RB1)
05169 Epstein-Barr virus infection
136137435 (RB1)
05165 Human papillomavirus infection
136137435 (RB1)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
136137435 (RB1)
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
136137435 (RB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pphc01009
]
136137435 (RB1)
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pphc03000
]
136137435 (RB1)
Protein phosphatases and associated proteins [BR:
pphc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136137435 (RB1)
Transcription factors [BR:
pphc03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
136137435 (RB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rb_C
RB_A
RB_B
DUF3452
TFIIB
RuvC_1
Motif
Other DBs
NCBI-GeneID:
136137435
NCBI-ProteinID:
XP_065751854
LinkDB
All DBs
Position
18:complement(18905493..19033329)
Genome browser
AA seq
926 aa
AA seq
DB search
MPPKTPRRAAAAAAAAEPPPPPPPPPPEEDPEQDSGPEDLPLARLEFEETEEPDFTALCQ
KLRIPDHVRERAWLTWEKVSSVDGVLEGYVQKKKELWGICIFIAAVDLDEMPFTFTELQK
NIETSVYKFFDLLKEIDTSIKVDNVISRLLKKYNVLCALYSKLERTCELIYLSQPSSSLS
TEINSMLVLKVSWLTFLLAKGQVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPYKTA
VIPINGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFKNFIPFMNS
LGIVASNGLPEVESLSKQYEEIYLKNKDIDARLFLDHDKTLQADPTDSFEVQRTPRKSNP
DEEVNVILPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRVNDI
GYIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLNDNIF
HMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAEANL
TREMIKHLERCEHRIMESLAWLSESPLFDLIKQAKDREGPADHLEPACTLNLPLQNNHTA
ADMYLSPVRSPKKKGSTTRVNSTANSEAQATSAFQTQKPLKSTSLSLFYKKVYRLAYLRL
NTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLKFK
IIVTAYKDLPHAVQETFKHVLIREEEYDSIIVFYNSVFMQRLKTNILQYASTRPPTLSPI
PHIPRSPYKFSSSPLRVPGGNIYISPLKNPYKISEGLPMPTKMTPRSRILVSIGESFGTS
EKFQKINQMVCNSDRVLKRSAEGSNPPKPLKKLRFDIEGSDEADGSKHLPGESKFQQKLA
EMTSTRTRMQKQKMNDSTDTSNREEK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgccgcccaaaaccccccgtagagcagcagccgccgccgccgccgcggagcccccgccg
cctcccccgccgccccctcctgaggaggaccccgagcaggatagcggccccgaggacctg
cctctggccaggcttgagtttgaagaaactgaagaacctgattttactgcattatgtcag
aaattaaggataccagatcatgtcagagaaagagcttggttaacttgggagaaagtttca
tctgtggatggagtcttggaaggttatgttcaaaagaaaaaggaactatggggaatctgt
atctttattgcagcagttgacctagatgagatgccattcactttcactgagctgcagaaa
aacattgaaaccagtgtctataaattttttgacttactaaaagaaatcgataccagtatc
aaagttgataatgttatatcaagactgttgaagaagtataatgtgttgtgtgcactctac
agcaaattagaaagaacatgtgaacttatatatttgtcacaacccagcagttcgctatct
acggaaataaattctatgttggtgctaaaagtttcttggctcacgtttttactagctaaa
gggcaagttttacaaatggaagatgatctggtgatctcatttcagttaatgctgtgtgtc
cttgactattttatcaaactctcacctcccgcattactcaaagaaccatacaaaacagct
gtaatacctattaatggttcacctcgaacaccaaggcgaggtcagaacaggagtgcacgg
atagcaaaacaactagaaaatgatacaagaattattgaagttctctgtaaagaacatgaa
tgtaatatagatgaggtgaaaaatgtttatttcaaaaattttataccttttatgaattct
cttggaattgtagcttctaacggacttccagaggtggaaagtctctctaaacaatatgaa
gaaatttaccttaaaaacaaagatatagatgcaagattatttctggatcatgataaaact
cttcaggctgatcctacagacagttttgaagtgcagagaacaccacgaaaaagtaacccc
gatgaagaagtaaatgtgattcttccacagactccagttcggactgtcatgaatactatc
cagcaattgatgatgatcttaaattcagcaagtgatcaaccgtcagaaaatctgatttcc
tattttaataattgcacagtgaatccaaaggaaagtatcctgaaaagagtgaatgatatt
gggtacatctttaaagagaaatttgctaaagctgtgggacagggatgtatggaaattgga
tcacagcgatacaaacttggagtccgattgtattaccgagtaatggaatccatgcttaaa
tcagaagaagaacgattatccattcaaaattttagcaaactcctgaatgacaacatcttt
catatgtctttgttggcatgcgctcttgaggttgtaatggctacatatagcagaagtaca
tctcagaatctggatactggaacagatttgtccttcccttggattctgaatgtacttaat
ttaaaagcttttgatttttacaaagtgattgaaagttttatcaaagcagaagccaacttg
accagagaaatgattaaacatttagaacgatgtgaacatcgaatcatggaatcccttgca
tggctctcagagtcacctttatttgatcttattaaacaagcaaaggaccgagaaggacca
gctgatcaccttgaacctgcttgtactctcaaccttcctctccagaataatcacactgca
gcagatatgtatctttctcctgtaagatccccaaagaaaaaagggtcaactacacgtgta
aattctactgcaaattcagaggcacaagcaacctcagccttccagactcagaagccattg
aaatctacctccctttcactcttttacaaaaaagtgtatcgactagcatatcttcgacta
aataccctgtgtgcacgccttctgtctgaccacccagaactagaacatatcatctggacc
cttttccaacacacactgcaaaatgagtatgaactcatgagagacaggcatttggaccag
attatgatgtgttccatgtatggcatatgcaaagtgaagaatatagaccttaaattcaaa
atcattgtaacagcatacaaagatcttcctcatgctgttcaggagacattcaaacatgtt
ttgatcagagaagaggagtatgattctattatcgtattctataattcagtcttcatgcag
agactgaaaacaaatattttgcagtatgcttccaccaggccccctaccttgtcaccaatt
cctcacattcctcgaagcccttacaagttttctagctcacctttacgggttcctgggggg
aacatctacatatcacccctgaagaatccgtataaaatttcagaaggtctgcctatgcca
acaaaaatgactccaagatcaaggatcttagtatcaattggtgaatcatttgggacttct
gagaagttccagaaaataaatcaaatggtgtgtaacagtgaccgtgtgctcaaaagaagt
gctgaaggaagcaaccctcctaaaccactgaaaaaactgcgctttgacattgaaggatcg
gatgaagcagatggaagtaaacatctcccaggggagtccaaatttcaacagaaactggca
gaaatgacatctactcgaacacgaatgcaaaagcagaaaatgaatgatagcacggatacc
tcaaacagggaagaaaagtga
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