Phocoena phocoena (harbor porpoise): 136141536
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Entry
136141536 CDS
T11058
Symbol
ARHGEF1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
pphc Phocoena phocoena (harbor porpoise)
Pathway
pphc04270
Vascular smooth muscle contraction
pphc04611
Platelet activation
pphc04810
Regulation of actin cytoskeleton
pphc04928
Parathyroid hormone synthesis, secretion and action
pphc05135
Yersinia infection
pphc05163
Human cytomegalovirus infection
pphc05200
Pathways in cancer
pphc05205
Proteoglycans in cancer
pphc05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
pphc00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
136141536 (ARHGEF1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
136141536 (ARHGEF1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
136141536 (ARHGEF1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
136141536 (ARHGEF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
136141536 (ARHGEF1)
05205 Proteoglycans in cancer
136141536 (ARHGEF1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
136141536 (ARHGEF1)
09171 Infectious disease: bacterial
05135 Yersinia infection
136141536 (ARHGEF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
136141536 (ARHGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pphc04131
]
136141536 (ARHGEF1)
Membrane trafficking [BR:
pphc04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
136141536 (ARHGEF1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
HVO_A0261_N
SOS1_NGEF_PH
HA
SET_assoc
Motif
Other DBs
NCBI-GeneID:
136141536
NCBI-ProteinID:
XP_065755807
LinkDB
All DBs
Position
20:11208346..11222454
Genome browser
AA seq
909 aa
AA seq
DB search
MALLQHVAMQFEPGPLLCCLHADMLGSLGPKEAKKAFGDFCHSFLDKCAILRVPVPPTVA
FELDRTRPDLLSEDVQRHFMQEVVQTQQAAVSRQLEDFRSKKLMGMTPWEQELIQLGAWV
GRDRATYEARERHLAERQLTHLEDMQHTISNDEEKSAAVVSAITLYMRHLGVRTKSGDKK
SGRNFFRKKVMGNRRSEEPTKTKKGLSSFLDAARWNRGEPQAPDFRHLKVEADGEKPGLT
ERKGGLGVPSRDRNVGAPGQDTPGVSLHPLSGDSPDREPGVDALPELGDPPPQGPASLEP
AAPLESTEEGADTERLSGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPSSA
TAVLGPARRATPEPGDEGEPGRSGLELEPEEPPGWRELVPPGTLHSLPKSQVKRQEVISE
LLVTEAAHVRMLRVLYDLFYQPMADGGFFSLEELQNIFPSLDELIEVHSLFLDRMMKRRQ
DSGYLIEEIGDVLLAQFDGTEGSWFQKISSRFCSRQSFALEQLKAKQRKEPRFCAFVQEA
ESRPRCRRLQLKDMIPTEMQRLTKYPLLLHSIGQNTGEPAEREKVELAAECCREILHHVN
QAVRDMEDLLRLKDYQRRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKDKA
VEVHVLLLDDLLLLLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHK
AFYVIFTWDQEAQIYELVAQTVSERKNWCALITETAGSLKLPARTSRPKHRPSPSSTREP
LVSSSENGNGGREMPPADGRMERIFSALLPFCRPGPEGQLAAKALQKVLSLKQLLLPSEE
DSGVGPPLEGDGVPGGGPPSPAQPQEIREELLSLEETIKQLEEVEEEFCRLRLLLSPLGE
NTVPQSGCT
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atggccctcctgcagcacgtggccatgcagttcgagccaggacccctgctgtgctgcctg
cacgcggacatgctgggctcactgggccccaaggaggccaagaaggccttcggcgacttc
tgccacagcttcctggacaagtgtgcgattctgcgggtgccggtccctcccaccgtggcc
tttgaacttgaccgcacgcggcccgacctcctctccgaggacgtccagcggcatttcatg
caggaggtggtgcagacccagcaggcagccgtcagccggcagctggaggacttccgctcc
aagaagctcatgggcatgacaccctgggagcaggagctgatccagctgggggcctgggtt
gggcgggaccgcgccacctatgaggcccgggagcggcacctggccgagcggcagctgacc
cacctggaggacatgcaacacaccatctctaacgatgaggaaaagagtgctgctgtggtc
agtgccatcaccctgtacatgcgccacctcggggtgcggaccaagagtggagacaagaag
tcggggaggaatttcttccggaaaaaggtgatggggaaccggcggtcagaagagccgacc
aagaccaagaaaggactgagcagcttcctggatgccgcccgctggaaccggggagagccc
caggcccccgattttcgacacctcaaagttgaggctgatggtgagaagccaggccttaca
gaacgtaagggaggtttgggggtgccctcccgggaccggaatgtcggagcccctgggcag
gacacccccggagtttctctgcaccctctgtctggggacagccctgaccgggaaccaggt
gttgacgccctcccggagctgggggacccgcccccgcagggcccagccagcctggagcct
gcagcacccctggagagcacagaggagggtgctgacacggagaggctgtcggggcgtctg
gggcgctcggagagcctgcgggtgagtgaccgccgccggccttcccggggcagcctcggg
gctaagggccggggtgggggccgctcccggagcgacgtggacatggaccccagctccgcc
acggctgtgcttggccctgcccgacgagccacccccgagcctggagatgagggggagccg
ggccgatcgggactagagctggaaccagaagagccccccggctggcgggagctcgtcccc
ccgggcaccctgcacagccttcccaagagccaggtgaagcggcaggaggtcatcagcgag
ctgctggtgacagaggcggcccacgtacgcatgctccgggtgctgtatgacctcttctac
cagcccatggcggatgggggcttcttctccctggaggagctacagaacatcttccccagc
ctggacgagctcatcgaggtgcattccctgttccttgatcgcatgatgaagcggaggcag
gacagtggctacctcatcgaggagatcggggatgtgctgctggcccagtttgatggtacc
gagggctcctggttccagaaaatctcctcccgcttctgcagccgccagtcgtttgcctta
gagcagctcaaagccaaacagcgcaaggagcctcggttctgtgcctttgtgcaggaggcc
gagagccgcccccggtgccgccgcctgcagctgaaggacatgatccccacggagatgcag
cggctgaccaagtacccgctgctcctgcacagcatcgggcagaacacaggagagcccgcg
gaacgggagaaagtggagctggcggctgagtgctgcagggaaattctgcaccacgtcaac
caagccgtgcgcgacatggaggacctgctgcggctcaaggattatcagaggcgcctggac
ttgtcccacctgcggcagagcagcgaccccatgctgagcgagttcaagaacctggacatc
accaagaagaagctggtccacgagggcccgctgacgtggcgggtgactaaggacaaggct
gtggaggtccacgtcctgctgctggacgacctgctgctgctgctgcagcgccaggatgag
cggctgctgctcaaatcgcacagccggacgctgacgcccacccccgacggcaagaccatg
ctgcggccggtgctgcggctcacctccgccatgacccgagaggtggccactgatcacaaa
gccttctatgtcatttttacctgggaccaggaggcccagatatacgagctggtggcccag
actgtgtcggagcggaagaactggtgtgccctcatcactgagaccgctggatccctgaag
ctccctgcccgcacctcccgacccaaacaccggcccagccccagcagcacccgtgaaccc
ctggtcagcagctctgagaacggcaacggtggccgagagatgcctccggctgacggccgg
atggagagaatcttcagcgccctcctgcccttctgcagaccaggccctgagggccagctc
gccgccaaggcccttcagaaagtgctgtccctgaagcagctcctgcttccctcggaggaa
gacagcggggtggggcctccgctcgaaggcgatggagtcccagggggcggccccccaagc
ccagcacagccccaggaaattcgggaggagttgctcagcctggaggagaccattaaacag
ctggaggaggtggaggaggagttttgccgcctgagactcctcctgtctccgctcggggag
aacactgtcccccagtctggctgtacctga
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