Pseudomonas phenolilytica: HU825_09420
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Entry
HU825_09420 CDS
T08532
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn00300
Lysine biosynthesis
pphn00550
Peptidoglycan biosynthesis
pphn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HU825_09420
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HU825_09420
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pphn01011
]
HU825_09420
Enzymes [BR:
pphn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HU825_09420
Peptidoglycan biosynthesis and degradation proteins [BR:
pphn01011
]
Precursor biosynthesis
Amino acid ligase
HU825_09420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Antitox_RHH
PipB2_N
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
UIP86752
LinkDB
All DBs
Position
1961695..1963161
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AA seq
488 aa
AA seq
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MPMPLNQLLPQADSSVLIRELTLDSRKVLPGDLFLAVPGLQHDGRSHIADAIARGAAAVA
YESEGAALQPAGTDAVLVPVRQLASQLSAIAGRFYGEPSRSLHLLGVTGTNGKTSVSQLI
AQALDRLGERCGIIGTLGHGFHGELEQGYHTTPDAIGVQATLASLKQHDARAVAMEVSSH
GLEQGRVAALAFDVAVFTNLSRDHLDYHGSMEAYAAAKARLFDMPGLRCRVINLDDAFGR
RLAAQPQESRLITYSLEDASADLYCPDPQLDDDGIHARLITPQGERSLRSPLLGRFNVSN
VLAAVGALLGMDWPLDEILAVLPELHGPAGRMQRLGGGDLPLVVVDYAHTPDALEKVLTA
LRPHARGHLVCLFGCGGERDRGKRALMAQVAERLADRVVATDDNPRNEPADQILEDIRQG
FAQPERVQFRPGRGAAIAAAIAAAQPEDVVVLAGKGHEDYQEICGVRQPFSDLDEARKAL
TAWGKHDA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgccgatgccattgaaccaactgctgccccaggccgacagttccgtgctgatccgcgag
ctgaccctcgatagccggaaggtgctcccgggcgacctgtttctcgccgttcccggtctg
cagcacgacggtcgcagccatatcgccgacgccattgcacgtggcgccgcggccgttgcc
tatgaatccgaaggcgctgcgctgcagcctgccggcactgatgcggtgctggtgccggtt
cgccagctcgccagccagctgtcggcaatcgccggccgcttctacggcgagccgagccgc
agcctgcatctgctcggggtgaccggcaccaacggcaaaaccagtgtcagccaactgatc
gcgcaggcgctggatcgtctcggcgagcgctgcggcatcatcggtacgctgggccacggc
tttcatggggagctggagcagggctaccacaccacgccggacgccatcggcgtgcaggcg
acgctggccagcctgaagcagcacgacgcgcgcgccgtggcgatggaggtctcctcgcac
gggctggagcagggccgcgtggccgcgctggcgttcgacgtggcggtcttcaccaacctg
tcgcgtgaccatctggattaccacggcagcatggaagcctacgcggcggccaaggcgcgt
ctgttcgacatgccgggtctgcgctgtcgtgtgatcaacctggacgacgccttcggccgt
cgactggctgcgcagccgcaagagtcgcgcctgatcacctacagcctggaggacgcctcg
gccgatctgtattgcccggatccgcagctggacgacgacggcattcatgcgcgactgatc
acgccgcagggcgagcgctcgctgcgcagcccgctgctggggcgcttcaatgtcagcaac
gtgctggcagccgtcggcgcgctgttaggcatggactggccgctggatgaaattctcgcc
gtgctgccggaactgcacggtccggccggtcgcatgcagcgtctgggcggcggcgacctg
ccgctggtggtggtcgattacgcccatacgcccgatgcgctcgaaaaggtgctcaccgca
ttgcgtccacatgcgcgcggacatctggtttgcctgttcggctgcgggggcgagcgcgac
cgcggtaagcgtgcgctgatggcgcaggtcgccgaacggctggccgatcgggtggtggcg
accgacgacaatccgcgcaacgagccggccgaccagattctcgaagacattcgccagggc
ttcgcccagccggagcgggttcaattccgcccgggacgtggagccgcgatcgccgcggcg
attgccgccgcgcagccggaggatgtggtggtgctagccggaaaggggcacgaggactat
caggagatctgcggcgtgcgtcagccgttctccgacctggatgaggctcgcaaggccctg
accgcctgggggaagcatgatgcgtga
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