Pseudomonas phenolilytica: HU825_11405
Help
Entry
HU825_11405 CDS
T08532
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
pphn
Pseudomonas phenolilytica
Pathway
pphn01501
beta-Lactam resistance
pphn01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
pphn00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HU825_11405
01503 Cationic antimicrobial peptide (CAMP) resistance
HU825_11405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pphn03036
]
HU825_11405
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pphn02000
]
HU825_11405
01504 Antimicrobial resistance genes [BR:
pphn01504
]
HU825_11405
Chromosome and associated proteins [BR:
pphn03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
HU825_11405
Transporters [BR:
pphn02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
HU825_11405
Antimicrobial resistance genes [BR:
pphn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HU825_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
HH_MFP_RND
HH_EMRA
HH_YBHG
Beta-barrel_RND_2
YknX_C
BSH_CzcB
HH_CzcB
HH_CyaD
CzcB_C
DUF1344
PI3K_P85_iSH2
Motif
Other DBs
NCBI-ProteinID:
UIP88549
LinkDB
All DBs
Position
2358407..2359537
Genome browser
AA seq
376 aa
AA seq
DB search
MREVRLAPLAVLLLLAGCGEKTAEQAAAPVPEVGVYTVQAQPLTLTTDLPGRTSAYRVAE
VRPQVSGILQQRLFTEGSEVKKGQQLYQIDPRTYEARLARAEANLTTAENLARRYERLLK
TNAVSQQQYDDAQAAWKQAQAEVQVARIDVQYTKVLAPISGRIGRSAVTEGALVTNGQAQ
ELATVTQLDPIYVDVNQPITKLLGLRRALESGRLQSSGDNQAEVSLTLDDGSAYPLPGTL
KFSEVSVDPTTGSVTLRAEFPNPDRKLLPGMFVHALLKEGTQQDAILVPQQAVSRDARGV
PSVWVVKPDDSVERREVETLRTVGNAWLIGKGVADGERVVTEGTQRVRSGITVKPVAASN
VRLVAEFAPKTDAVAN
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgaggttcggctggcgccactggcggtgctgctcctgctggccggctgtggcgaa
aagacggcggaacaggccgcggcgccggtgcccgaggtcggcgtctacaccgtgcaggcg
cagccgctgacgctgaccaccgacctgccgggtcgcaccagcgcctaccgggtcgccgag
gtgcgcccgcaggtttccggcatcctccagcagcgcctgttcaccgagggctcggaggtg
aagaaaggccagcagctgtaccagatcgatccgcgcacctacgaggcgcgcctggcccgc
gccgaagccaacctgaccaccgccgagaacctggcccgccgctacgagcgtctgctgaag
accaatgcggtcagccagcagcagtacgacgacgcccaggccgcctggaagcaggcgcag
gcggaagtgcaggtggcacgcatcgacgtgcagtacaccaaggtgctggcgccgatctcc
gggcgcatcggccgctcggcggtgaccgagggggcgctggtcaccaacggccaggcccag
gaactggccaccgtgacccagctcgatccgatctacgtggacgtcaaccagccgatcacc
aagctgctcggcctgcgccgcgcgctggaatccggccgcctgcagagttccggtgacaac
caggccgaggtcagcctgaccctggacgacggcagcgcctatccgttgcccggtaccctg
aagttctccgaggtgagcgtcgacccgaccaccggctcggtgacgttgcgcgccgaattt
cccaacccggaccgcaagctgctgcccggcatgttcgtgcatgcgctgctcaaggaaggc
acccagcaggacgccatcctcgtgccgcagcaggcggtcagtcgcgatgcgcgcggcgtg
cccagcgtctgggtggtcaagccggacgacagcgtcgagcggcgcgaagtcgagacattg
cgcaccgtcggcaatgcctggctgatcggcaagggcgtcgccgatggcgaacgggtggtc
accgaaggcacgcagcgggtgcgcagcggcatcaccgtcaagccggtggcggccagcaac
gtcagactggtcgccgagttcgctccgaagaccgacgccgtcgccaactaa
DBGET
integrated database retrieval system
