Pengzhenrongella phosphoraccumulans: VTA80_11275
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Entry
VTA80_11275 CDS
T10828
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
pphp Pengzhenrongella phosphoraccumulans
Pathway
pphp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pphp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
VTA80_11275 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pphp03400
]
VTA80_11275 (nth)
Enzymes [BR:
pphp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
VTA80_11275 (nth)
DNA repair and recombination proteins [BR:
pphp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
VTA80_11275 (nth)
Prokaryotic type
VTA80_11275 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Motif
Other DBs
NCBI-ProteinID:
WVT82439
LinkDB
All DBs
Position
2452006..2452713
Genome browser
AA seq
235 aa
AA seq
DB search
MARTGKDPESHLALVRRARRINRELGLRYPDAHCELDFTSPLELLVATVLSAQCTDKRVN
LVTPELFARYPDAISYAGADRAELEDLIRSTGFFRAKSESLLGIGRALTERFDGEVPRRL
ADLVTLPGVGRKTANVVLGNAFGIPGITVDTHVGRLARRLELTADDDPIKVERDLADLIE
RREWTLLSHRLIFHGRRTCFARNPACGACPIARDCPSAGIGESDPVRAAAMIKES
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
gtggcacgaaccggcaaagaccccgaatcccaccttgccctggttcggcgcgcgcgccgc
atcaatcgcgagctcggactgcgttatcccgatgcccactgcgagctggacttcacctca
ccgctcgagctgctcgtcgccacggtgctgtccgcgcagtgcactgacaagcgcgtcaac
ctcgtgacgcccgaacttttcgcccgctaccccgacgcgatcagctacgccggcgccgac
cgcgccgagctcgaggacctcatccgttcgacaggattcttccgggcgaagtccgagtcg
ctgctcgggatcgggcgcgcgctgaccgagcggttcgacggtgaggtgccccgcaggctc
gccgacctcgtgactcttccgggggtcgggcgcaagacggccaacgtggtcctcggcaac
gcgttcggcatccccggcatcaccgtggacacccacgtcggtcgcctcgcgcgccggctc
gagctcacggccgacgacgacccgatcaaggtcgagcgcgacctggccgacctcatcgag
cgccgggagtggaccctgctgtcgcaccggctgatcttccacggccggcgcacctgcttc
gcgcgcaacccggcgtgcggggcgtgcccgatcgcccgggactgcccgtccgccggcatc
ggcgagagtgatcccgtgcgagctgcggcgatgatcaaggagtcgtga
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