Pannonibacter phragmitetus: APZ00_05500
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Entry
APZ00_05500 CDS
T04214
Symbol
sucA
Name
(GenBank) 2-oxoglutarate dehydrogenase subunit E1
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
pphr
Pannonibacter phragmitetus
Pathway
pphr00020
Citrate cycle (TCA cycle)
pphr00785
Lipoic acid metabolism
pphr01100
Metabolic pathways
pphr01110
Biosynthesis of secondary metabolites
pphr01120
Microbial metabolism in diverse environments
pphr01200
Carbon metabolism
pphr01210
2-Oxocarboxylic acid metabolism
Module
pphr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pphr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pphr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
APZ00_05500 (sucA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
APZ00_05500 (sucA)
Enzymes [BR:
pphr01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
APZ00_05500 (sucA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
Transket_pyr
OxoGdeHyase_C
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
ALV26601
UniProt:
A0A0L0IYF4
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All DBs
Position
1161669..1164656
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AA seq
995 aa
AA seq
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MARQDANNVFAMTSFLYGANAAYIEELYAQYQENPASVDAEWQDFFAALKDDKADVLKEA
RGAPWKRADWPLAAKGDLVNACDGNWAPVEKAVGDKLKQKGDAKGKPLSDAEVQQATRDS
VRALMMIRAYRMRGHLHADLDPLRLSPPGDHEELHPSSYGFTDADWDRPIFIDHVLGLEY
ATLRQMLEILKRTYCSTLGVEFMHISDPAAKAWIQERIEGPDKHVEFTPQGKRAILNKLV
EAEGFEKFIDVKYTGTKRFGLDGGEALIPALEQIIKRGGQLGLKDIVLGMAHRGRLNVLT
QVMGKPHRAVFHEFKGGSYAPDDVEGSGDVKYHLGASSDRSFDGNEVHLSLTANPSHLEI
VNPVVLGKSRAKQDQISAVDGRWMVDTAQIDRSPVLPLLIHGDAAFAGQGVVAECFGLSG
LRGHRTGGSIHVIINNQIGFTTNPRFSRSSPYPSDVAKVIEAPILHVNGDDPEAVVYAAK
IATEFRQTFGRPVVIDMICYRRFGHNEGDEPAFTQPIMYRKIRKHPTTLQLYTDRLIAEG
VVSAEEVEGMKAAWRAKLDTEFEAGQVYKPNKADWLDGKWSGLKRADDEEDPRRGSTGVA
MDDLKALGKKLTEVPEGFNVHRTISRFLANRQTMMETGEGIDWATAEALAFASLLKEGHP
VRLSGQDCERGTFSQRHSVLYDQEDESRYIPLNHVSEDQARYEVINSMLSEEAVLGFEYG
YSLAEPNALTMWEAQFGDFANGAQVLFDQFISSGERKWLRMSGLVCLLPHGYEGQGPEHS
SARLERFLQLCAEDNMQVANCTTPANYFHILRRQLKRDIRKPLILMTPKSLLRHKRAVSK
LVELGEDSTFHRLLWDDAEYQPDGATRLVADDKIRRVVMCSGKVYYDLLEEREKRGINDV
YLLRVEQIYPFPKKALAQELARFRNADMVWCQEEPKNMGSWFFVEPYIEWVLDQIGAKCR
RPRYAGRDAMASTATGLMSKHLAQLQAFLDEAFAS
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcaggacgcgaacaatgtcttcgcgatgacgtcgtttctctacggcgccaac
gcagcctatatcgaagaactctacgcccagtatcaggagaaccccgcctcggttgatgcc
gagtggcaggacttctttgctgcgctgaaggacgacaaggccgatgtgctgaaggaagcg
cgtggcgctccctggaagcgcgccgactggccgctcgccgcgaaaggcgatctcgtcaat
gcctgtgacggcaattgggctccggtcgaaaaggccgtgggcgacaagctgaagcagaag
ggcgatgccaagggcaagccgctctcggatgccgaagtgcagcaggcgacccgcgacagc
gtgcgtgcgctgatgatgatccgcgcctaccgcatgcgcggccatctgcatgccgatctc
gatccgctgcgcctctcgcccccgggcgatcacgaggagctgcacccctcgtcctacggc
ttcacggatgccgactgggaccgtccgatcttcatcgatcacgtgctgggcctggaatat
gccaccctgcgccagatgctggagatcctgaagcgcacctattgctcgaccctcggcgtc
gagttcatgcacatttccgatccggccgccaaggcctggatccaggagcgcatcgaaggg
ccggacaagcacgtcgagttcaccccgcagggcaagcgcgccatcctgaacaagctggtc
gaagccgaaggcttcgagaagttcattgatgtgaagtacaccggtaccaagcgcttcggc
cttgatggcggcgaagcgctgatcccggcgctggagcagatcatcaagcgcggcggccag
ctcggcctcaaggacatcgttctcggcatggcccaccgcggccgcctgaacgtgctgacc
caggtgatgggcaagccgcaccgcgccgtgttccacgagttcaagggcggctcctacgcc
ccggacgatgtggaaggctcgggcgatgtgaagtatcacctcggtgcgtcttccgaccgt
tccttcgacggcaacgaggttcacctgtcgctgacggcgaacccctcgcatctggaaatc
gtcaatccggtggtgctcggcaagtcccgcgccaagcaggaccagatttccgccgttgac
ggccgctggatggtggataccgcccagatcgaccgctccccggttctgccgctgctgatc
cacggtgacgcggcctttgccggccagggcgtcgtggcagagtgcttcggcctgtcgggc
ctgcgcggccaccgcaccggcggctcgatccacgtcatcatcaacaaccagatcggcttc
accaccaatccgcgcttctcgcgctcctcgccctatccctcggatgtggcgaaggtcatc
gaggcgccgatcctgcatgtcaacggcgacgatccggaagccgtggtctatgcggccaag
atcgcaaccgagttccgccagacctttggccgcccggtcgtgatcgacatgatctgctac
cgccgcttcggtcataacgaaggcgacgagccggcgttcacgcagccgatcatgtaccgc
aagatccgcaagcacccgacgacgctgcagctctacaccgaccgcctgatcgcggaaggc
gtggtttcggctgaagaggtcgagggcatgaaggccgcatggcgcgccaagctcgacacc
gagttcgaggctggccaggtctacaagccgaacaaggccgactggctggacggcaagtgg
tcaggcctgaagcgggctgacgacgaggaagatccgcgccgcggctcgaccggcgttgcc
atggatgacctcaaggctctgggcaagaagctcacggaagtgccggagggcttcaacgtc
caccgcaccatctcgcgcttcctcgccaaccgtcagaccatgatggaaaccggtgagggc
atcgactgggcgacggccgaggcgctggcttttgcaagcctgctgaaggagggccatccg
gtccgcctgtccggccaggactgcgaacgcggcaccttctcccagcgccacagcgtgctc
tacgatcaggaagacgaaagccgctacatcccgctgaaccatgtcagcgaggatcaggcc
cgctacgaggtcatcaactcgatgctctcggaagaggccgtgctcggcttcgaatacggc
tactcgctggcagagccgaacgcgctcaccatgtgggaagcccagttcggtgacttcgcc
aacggtgcccaggtgctgttcgaccagttcatctcgtctggcgagcgcaagtggctgcgt
atgtccggtctcgtctgccttctgccgcatggctatgaaggtcagggtccggaacactcc
tccgcccgtctggagcgtttcctccagctctgcgcggaagacaacatgcaggtcgccaac
tgcaccacgccggcgaactacttccacatcctgcgccgtcagctgaagcgcgacatccgc
aagccgctgatcctgatgacgccgaagtcgctgctgcgccacaagcgggcggtgtccaag
ctcgtcgagctgggtgaggattccacgttccaccgcctgctgtgggatgatgccgagtac
cagcccgatggcgccacccgcctcgtcgcggatgacaagatccgccgggtcgtcatgtgc
tccggcaaggtctactacgacctgctggaagagcgtgaaaagcgcggcatcaacgacgtg
tacctgctccgcgtcgagcagatctacccgttcccgaagaaggccctcgcccaggaactg
gcccgcttccgcaacgccgacatggtctggtgtcaggaagagcccaagaacatgggcagc
tggttcttcgtcgaaccgtacatcgaatgggtgctcgaccagatcggcgccaagtgccgc
cgcccgcgctacgccggccgcgacgccatggcctcgacggcaacgggcctgatgtccaag
catctggcccagctccaggcattcctggacgaagcattcgcaagctga
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