Candidatus Pelagisphaera phototrophica: GA004_03535
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Entry
GA004_03535 CDS
T09061
Name
(GenBank) PatB family C-S lyase
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00270
Cysteine and methionine metabolism
ppht00450
Selenocompound metabolism
ppht01100
Metabolic pathways
ppht01110
Biosynthesis of secondary metabolites
ppht01230
Biosynthesis of amino acids
Module
ppht_M00017
Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
GA004_03535
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
GA004_03535
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppht01007
]
GA004_03535
Enzymes [BR:
ppht01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
GA004_03535
Amino acid related enzymes [BR:
ppht01007
]
Aminotransferase (transaminase)
Class II
GA004_03535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
FAE1_CUT1_RppA
Motif
Other DBs
NCBI-ProteinID:
QXD33819
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Position
complement(766786..767931)
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AA seq
381 aa
AA seq
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MDSIFDQVHERRHTDSQKWHKYAGQDILPMWVADMDFKAPEPVLQALHERIDHGIFGYAR
PERDTIEAVIGMLQRNYDWAVEEEWLVWLPGLVVGLNITSRAFAEPGEKILTTTPIYPPF
LLGPRFQNRSVTKAKMALDGDKWVIDWEAMEAAVDSQTRMFFFCNPHNPCARVFDRSELE
AVAAFCQRHNLILCSDEIHCELLLDGRSHTPIATLSEEVSKNSFTLIAPSKTYNLAGLGC
SLAIIPDKGLRHRFNSATRGIMAEVNNLGYTACEAAYRDGGPWREELLRYLGANRDCIHS
FVKERIPEIGVYQHEATYLSWLDVTAFDLSDPVAHFESYGVGLTDGAFFDSPGHVRLNFG
CSRLTLKEGLERMEKAVDALR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggactcgatattcgaccaagtacacgaacgccgccacactgatagccagaaatggcat
aagtacgcgggccaggacatcttgcccatgtgggtagccgacatggacttcaaggcccca
gaacccgtcttgcaagccttgcacgaacgaatcgatcacggcatcttcggctacgcccgt
ccggagagagatacgatcgaagcggtcatcgggatgctgcagcgcaactatgactgggca
gtagaagaggaatggctagtctggctgcccggattggtcgtagggctcaacattactagt
cgggcctttgcggaacctggcgaaaaaatcctgactacgacccccatctaccctcccttt
ctcctcggccctcgttttcagaatcgatccgttactaaagcgaaaatggctctggacgga
gacaaatgggtgattgactgggaggcgatggaagcggccgtcgattcgcaaaccaggatg
ttctttttctgtaatccacacaacccgtgtgcccgcgtattcgaccgatcagagctagaa
gcggtcgccgcgttttgccaacgtcacaacttaatcctatgttccgatgaaatccattgc
gagctattgctcgatggacggtcccacacacccattgccacattgtcagaggaggtttcg
aaaaactccttcaccctaatcgctccgagcaagacctacaatttagcgggactgggatgt
tcgctggccattatccccgataagggtcttcgccatcggttcaattctgcgactcgaggg
atcatggctgaggtcaacaatctcggctatactgcctgtgaagcagcttatcgggatggc
ggtccctggcgagaagagctcctccgctatctcggagccaatcgggattgtatccactct
ttcgtaaaagagcgcattccagaaattggagtctaccagcatgaagcgacttatctttct
tggttggacgtgaccgccttcgatttgagtgatcccgtggcgcattttgaatcgtacgga
gttgggcttaccgacggagctttcttcgatagtcccggtcacgttaggctcaacttcgga
tgctcccgcttaaccttgaaggaagggctcgaacgaatggaaaaagcggtcgacgcgctg
cgctag
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