Candidatus Pelagisphaera phototrophica: GA004_05225
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Entry
GA004_05225 CDS
T09061
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht01501
beta-Lactam resistance
ppht01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GA004_05225
01503 Cationic antimicrobial peptide (CAMP) resistance
GA004_05225
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppht02000
]
GA004_05225
01504 Antimicrobial resistance genes [BR:
ppht01504
]
GA004_05225
Transporters [BR:
ppht02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
GA004_05225
Antimicrobial resistance genes [BR:
ppht01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GA004_05225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
QXD33113
LinkDB
All DBs
Position
1184892..1188017
Genome browser
AA seq
1041 aa
AA seq
DB search
MSEIIKSITDIFIRRPVLAIVVNLVIVIAGGQAIYNATSGSGGFTVRQYPQSENALVTVT
TFYIGADADLVKGFVTTPLERVIAAADGIDYIESSSVQSLSTISIRLKLNVDAIKVLAEI
SSKVDQVRGDLPPEAEVPIINVETADTRVASMYLSFKSSNLERNEVTDYLTRAVQPALTA
VKGVQRADILGARALAVRVWLKPEKLAAFNISATEVRLALASNNVLAAVGKTKGSYEQIS
LSSNANLTSVEEFQELILREERDQVIHLADVADVELGAESYDADVRFGGEQAVFMGIWVM
PSANSLDVIKRVRAEVEAMQDRFPVGFEGGVGYDATEYIDNALKEVVVTLSETLLIVVVV
IFLFLGSVRSVLVPLVAIPVSLIGGIFLMQIFGFSINLLTLLAIVLAVGLVVDDAIVVVE
NVERYLRDGNSPKDAALKGARELVGPIIATTITLATVYAPIAFQGGLTGSLFREFTVTLA
GAVIVSSVVALTLSPMMASKVLKANSEEKGFRGVVNRFFDRLRERYRKMIEGTLKARPAV
YTLWGFLTFLVIPLYVLSSMSTELAPTEDKGIIFGLLSTSSNSTIEQSSHFSKQVQDVFA
STPEYDYSFQITSPTGGFGGMIVKPWGERERHIIDIRQSMIPQLGSVPGIKLLPVLPPAL
PGGSNFPVEYIISSTAETEQIAALARQVANNAAATGLFAFPPELDVKIDEPQSKIIFDRD
KVAALGMNLSDVGNDLSVLLGGNYVNRFSIDGRSYKVIPQVKRTSRLAPEDLADMYVRGP
NGNLVPLSSFATIENSVKPRSLNRFNQLNSVKISGIAMAPLDAALKVLEEESAKILPNGY
AIDYAGESRQLRKEGSSFFPMLMLALVLVFLVLAAQFNSFRDPLIIILGSVPLGMFGALL
FTAMRAPGDPWTPHWSWGWTSSWNIYSQVGMITLLGLVTKNSILIVQFANVLQERGRSKL
KAASEAAATRLRPILMTSAATIFGHMMLVFVSGAGAAARNSIGLVLVGGMAIGTLFTIFI
VPSLYMLLAKNHQNDIAEVSA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagattatcaaatccattacggacatctttatccggcggccggtactggctatt
gtcgtgaaccttgtcattgttatcgcgggaggccaggcaatctacaatgcgacatcggga
tcgggtgggtttacggtgcgccaatatccgcagagcgagaatgccctcgttacggtgacg
actttctacattggagctgatgcggatctcgtgaagggatttgttacgacaccgttagag
cgagtcatcgctgcagcggacggaatcgattatatcgaatctagcagtgttcaaagcctt
tcgacaatctccatccggttgaagctgaacgtcgatgccattaaagtgctggcggaaatc
tcctctaaagtggatcaagtgaggggggatctgccgccggaagctgaggtgccgataata
aatgttgaaacggcggatacgagagtcgcttcgatgtatttgagtttcaagtcttccaat
ctggagcgaaatgaagtgaccgactacttgactcgtgccgtgcagccagcgttgacagcg
gtcaaaggtgtgcagcgagcggacatattaggagcccgcgccctcgccgtccgcgtttgg
ctcaaaccggaaaagctagcggccttcaatatcagtgcaacggaagttcggttggcgctc
gcatccaacaatgttcttgcggcggtggggaaaactaaggggagctatgagcagatcagc
ctgagttccaacgcgaatctcacctcggtggaagagtttcaggaactgatattgcgcgag
gaaagggatcaggtaattcatttggccgatgtagccgatgttgagttgggagcggagagc
tatgatgccgatgtgcgttttggcggcgaacaagcggtttttatgggtatttgggtgatg
ccatccgcaaactcgctcgatgtaatcaagcgggttcgggccgaggttgaggcgatgcag
gaccgttttccggttggatttgaaggaggtgttgggtatgatgccaccgaatacatcgac
aatgcccttaaggaagtagtggttaccctttctgagactctattgattgttgtcgtggtg
atttttcttttcctcgggtctgtccgttccgttctagtgcctttagtcgcgataccggtc
tcattgattggggggattttcctcatgcagatttttggtttcagtatcaatcttttgaca
ctgctagccatcgttctagcagtgggactagttgtcgatgatgcaatcgttgttgtagaa
aatgtcgaacgctacctgcgtgatggaaactctcctaaggacgccgctctgaaaggagcc
cgagagctggtagggcccattattgcaacgacaattacccttgctaccgtttatgctccg
atcgcctttcagggcggattgaccggctcgctgtttagggaattcacagttacattggcc
ggggcagtcattgtatctagtgtggtagcgctgacattatccccgatgatggcctctaaa
gtgctaaaggcgaacagcgaggagaaagggtttcgaggcgtggtaaaccggtttttcgat
cggttgcgtgagcgttaccgaaagatgatcgaaggtacattgaaggctcgcccagctgtt
tatacactttgggggtttctgacttttctggtaataccgctatatgtcctgtcctcgatg
tctaccgagttggcacctaccgaagacaagggtattatatttgggctactgagcacttca
tccaattctaccatcgagcaatccagtcacttttcaaaacaagtgcaggacgtttttgcg
tcgactccagaatacgactactccttccagattacatcccccacagggggctttggaggg
atgatcgttaagccatggggtgaacgagaacggcacatcatcgatattcgtcaaagtatg
atacctcagttaggaagcgttccaggtattaaacttttgcccgtccttccacccgcactt
ccgggaggtagcaactttcctgtagaatacatcatttcatccaccgccgaaaccgagcaa
attgctgctctagctcgtcaagtagccaacaacgcagctgcaactggactatttgcattt
ccgccagagctggatgtgaagatagacgagccacagtcgaagatcattttcgatcgtgat
aaagtagcagcattgggaatgaatctttccgacgtcggaaatgatctgagcgttttgctc
ggagggaactacgtgaatcggttttcgatagatggtcgtagctataaggtaatccctcaa
gtgaagcgcacgagtcggcttgcccctgaagatctcgccgacatgtacgtgagggggccg
aatgggaatttagtgccgctctctagcttcgcgacgattgagaattcagttaaaccgcgg
agcctgaatcggtttaaccagctgaattctgttaagatttccggcatagcgatggctcct
ttggatgcggcgctaaaagttttggaggaagagtctgcgaagattttgccgaatggttac
gcgatcgactatgcgggagagtcgcgtcaattgaggaaagaagggagcagttttttccct
atgctgatgttagcattggtattggtatttctggttcttgcggcgcagtttaactctttc
agggatcctttgatcatcattctaggctctgtgcccttggggatgtttggggctttgctt
ttcaccgcaatgcgagctcctggcgatccttggacgcctcattggtcttgggggtggacc
tcctcttggaatatatactcgcaggtgggaatgattactttattgggactagtcactaag
aatagtatcctcatcgtccagtttgccaatgtattgcaagaacggggacgcagtaagcta
aaggcggccagtgaagcggctgcgacacgactgagacctattttaatgacctcagcagcc
actatcttcgggcatatgatgctcgtgttcgtttcaggtgcgggtgctgccgctcgaaac
tcgattggtctcgtattggttggggggatggcgatcgggacgctcttcactatctttatc
gttccctcgctttacatgctactggccaagaatcatcagaatgacattgcggaggtgtcg
gcatga
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integrated database retrieval system
