Candidatus Pelagisphaera phototrophica: GA004_07975
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Entry
GA004_07975 CDS
T09061
Name
(GenBank) KamA family radical SAM protein
KO
K01843
lysine 2,3-aminomutase [EC:
5.4.3.2
]
Organism
ppht
Candidatus Pelagisphaera phototrophica
Pathway
ppht00310
Lysine degradation
ppht01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppht00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
GA004_07975
Enzymes [BR:
ppht01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.3 Transferring amino groups
5.4.3.2 lysine 2,3-aminomutase
GA004_07975
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Gene cluster
GFIT
Motif
Pfam:
LAM_C
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
QXD33617
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Position
1844437..1845627
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AA seq
396 aa
AA seq
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MPYIEDRKDWFEGQGLWEVVPEEKWNDWKWQLRNRITSLEELEAKMELTDEEREGCRHAN
EKLAMAITPYFFNLIDRDDPDCPVRKQLIPRSGEMAVSAEEMLDPVGEDSHSPVPGLVHR
YPDRVLFLVTDRCAAYCRYCTRSRLVSNAQDYNFHPEFEQGLKYIESHPEVRDVLLSGGD
PLLLSDSKLDYILGRLRQIPHIEFIRIGSRIPVFMPQRITEELCDVFRKHGPIWMSIHVN
HPRECTAALKDACERLSFAGVPLGNQSVLLKDVNDDADVMKALIHRLLRMRVRPYYIYQC
DLITGSAHLRASVCKGLEIMKKLRGHTTGYAVPQFVIDAPGGGGKVPINPQYITKIDDDA
IHFRNFEGKLYRYPLKSFTIDDDCRFNEEEVECLEP
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacatcgaagacagaaaagattggtttgaaggccaagggctttgggaggtcgtt
ccggaggaaaagtggaacgattggaaatggcagctccggaatcgcatcacttccttggaa
gagctcgaggcaaagatggaactgactgacgaagagcgagaaggttgtcgtcacgcgaac
gaaaaattggcgatggcgatcactccctactttttcaatttgatcgatcgcgatgatccc
gactgccctgttcgcaagcaattgattccccgttcgggtgagatggccgtttcggctgag
gagatgctggatcctgttggcgaagattcgcactcaccagttccaggcttagtgcatcga
tatccggatcgagtcctgtttttggttaccgatcgctgtgctgcctactgccgctattgc
actcgcagccgcttggtcagcaacgcccaagactataactttcatccggaattcgagcaa
gggcttaagtacatcgagtcacaccccgaagtgcgggacgtgcttttaagtggtggagac
cctttgctcttgtcggatagtaagctggattatattttgggaagactcaggcagattcct
cacatagagtttattcggatcggttcgcgaatccccgtatttatgccccagcgtatcact
gaggagctttgcgacgtatttcgaaagcatgggccgatttggatgagtatacatgtaaat
caccctagggagtgtaccgccgctcttaaagatgcctgtgagcgactgtctttcgccggc
gttcctttggggaatcaatccgttctcttgaaggatgtgaatgatgatgcagatgtgatg
aaagctttgatacatcgtttgttgaggatgcgagtgcgcccatattatatttaccagtgc
gacttgatcactgggagtgcccacttaagggcgagtgtctgtaagggccttgagattatg
aagaagctgcgcggccatacaaccggttatgccgttcctcagttcgttatcgatgcccct
gggggagggggaaaagtgccgatcaacccgcagtacattactaagattgacgatgacgcc
attcattttcgcaacttcgaaggcaagttataccggtatccgctcaagagtttcacgatc
gacgatgattgccgctttaatgaagaggaggttgagtgcctggagccttag
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