Phoxinus phoxinus (Eurasian minnow): 306989181
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Entry
306989181 CDS
T12064
Symbol
scn4aa
Name
(RefSeq) sodium channel protein type 4 subunit alpha A
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphx04040
]
306989181 (scn4aa)
Ion channels [BR:
pphx04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
306989181 (scn4aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
306989181
NCBI-ProteinID:
XP_079450737
LinkDB
All DBs
Position
21:complement(27160298..27201276)
Genome browser
AA seq
1831 aa
AA seq
DB search
MASLLTDLYTLRKFTPESLAEIDRLIQERSTRGEVDGAEEEPLAPSNDLEAGKCLPMIYG
EPPKDLLNTPLEDLDPFYKAQKTFIVISKGNTIYRFAAEPAVLCISPFSLVRRGAIKILI
HSYFSMFIMITILANCVFMTMSNPPAWSKTVEYVFTGIYTFEATIKVLSRGFCVGPFTFL
RDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVGALIQSVKK
MVDVMILTVFALAVFALIGLQLFMGNLRHKCIRWPIPNSTIFDVYNSTMVNDTSLNVTDT
FDFKEYIGNEENQYFLEESSDALICGNSSDAGRCPEGYTCMKAGRNPNYGYTSYDNFGWA
FLSLFRVMTQDYWENLFQLTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYDEQNA
ATLAEAIEKEEKFQRLLLQLKNQEVGSKASLASQTTQSRGSSRTGSLHSLDGDDDIKDCN
GRVVPRLIINRVSSERELSQEKFTGDPLEEDDKSMSSKHSMQYLDQPQLSKRTASAISVL
TATMEDIEDAQRPCPPGWYKFADIFLKWDCWAPWVIFKNWVHFVVMDPFVDLGITICIVL
NTLFMAMEHYPMSPDFEHVLSVGNLVFTGIFTAEMVFKLIALDPYYYFQVGWNIFDSIIV
TLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLSMLIKIIGNSVGALGNLTLVLAII
VFIFAVVGMQLFGKSYKDCVCKISQDCELPRWHMNDFFHSFLIVFRILCGEWIETMWDCM
EVAGANMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSGGDDDGEMNNLQIAIGRIT
RGMDWLKAFVASVVGQILGKKPPGNNEGEVEGDIELYAFNHMDEGKMADGLTNSLSPTLT
VPIARFESDVEEDSYESSDEEDRKATLNDDDSSVCSTVDYRPPEPEPEPEEEEEPEPEEP
ESCFTEGCVKRCKCLTVDITEGWGKKWWNLRKTCFTIVEHDYFETFVIFMILLSSGALAF
EDINIERRRVIKIILEYADKVFTYIFIVEMLLKWVAYGFKTYFTNAWCWLDFLIVDVSLV
SLTANLMGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIFNVLLVCLIF
WLIFSIMGVNLFAGKFYHCINTTTEERFPMDVVNNRSDCMALMHTNEARWVNVKVNYDNV
GLGYLSLLQIATFKGWMDIMYAAVDSREVEEQPSYEINLYMYLYFVIFIIFGSFFTLNLF
IGVIIDNFNQQKSKFGGKDLFMTEEQKKYYNAMKKLGSKKPAKPIPRPSNIILGLVFDFI
TKQFFDIFIMVLICLNMVTMMIETDDQSTEKEDILYLINLVFIIIFSGECILKMFALRQY
FFTIGWNVFDFVVVILSVAGLMLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRT
LLFALMMSLPALFNIGLLLFLIMFIFSIFGMSNFAYVKKQAGIDDIFNFETFGGSIICLF
EITTSAGWDGLLLPIMNSPPDCDPDIENPGTDVRGNCGNPGMGIMFFCSYIIMSFLVVVN
MYIAIILENFNVAQEESGDPLCEDDFTMFDETWEKFDVDATQFIEYNRLFDFVDTLQEPL
RIAKPNRLKLITMDLPIVTGDKIHCLDILLAVTREVLGDTIEMAAMKESIEAKFIMNNPT
SASFEPITTTLRRKEEERAAIAVQRTYRRHLLKRAIRHACFMRRLKRKVSSQADEEPLET
QGLIARKMDALYGSNPELAMALELQARPMPSNEQPPEPTSVPQHGASVTYPRPQGQLIIP
VEFTREVILRSAPTVHGLCSSENATLKESIV
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcctgctcacagacttatacacgttacgcaaattcaccccagagtcgctggcg
gagatcgacaggctcatccaggagaggagcaccaggggggaagtagacggggctgaggag
gagccactggcaccgagcaatgatctggaggcaggaaagtgtctgcccatgatctatggt
gaaccaccaaaggatctcctcaacacgcctctggaggatctagaccccttctataaagca
cagaaaacgtttattgtcataagcaagggaaacacaatctacaggtttgcagctgaacca
gcagtgctttgtatcagtccttttagtcttgtcagaagaggagcgatcaaaattcttata
cattcatattttagtatgttcatcatgatcaccatcctggccaactgcgtgttcatgacc
atgagtaaccctccagcctggagtaaaacagtcgagtatgtttttactggtatatatacc
tttgaagcaacaatcaaagttttgtcacgaggcttctgcgtgggacctttcacattcctt
cgtgatccatggaactggcttgatttcatggtgattagcatggcgtacgtcacagagttt
gtagaccttggtaatgtgtcagcactgaggacgtttcgtgtgcttcgagctctcaaaaca
atcacagttatccctggtttgaaaaccattgtcggggctttgattcagtcagtcaagaag
atggtagacgtaatgattttgaccgtctttgcactggctgtatttgccctcattggcctg
cagctgttcatgggaaatctacgtcataagtgcatccgttggcccattcccaacagcacc
atctttgatgtctacaactccaccatggtcaatgacaccagcctcaacgtcacagatact
ttcgatttcaaagaatacataggcaatgaagaaaaccaatactttctggaagaaagttca
gatgctttaatatgtggtaacagctctgatgctgggaggtgcccagaaggatacacttgt
atgaaggctgggcgaaacccaaattatggctacaccagctatgacaactttggctgggcc
tttctctccctcttcagagtcatgactcaggactattgggagaatctcttccagttgacc
cttcgtgctgctgggaagacctacatgatcttctttgtggtggttatcttcctgggctct
ttctacctcatcaatctgatcttggctgtggttgcgatggcatatgacgagcagaatgcg
gccaccttggctgaggccattgagaaagaagagaagtttcaaagattgctcttgcagctc
aagaaccaagaggtaggcagtaaagcatctctggccagccagacaactcaaagtcgaggg
tccagcaggacaggttccctgcacagtcttgacggcgatgatgacataaaggactgtaat
ggccgggttgtgcctcgcctcatcatcaacagagtctcctctgaaagagagttatcacaa
gagaaattcacaggagatcctcttgaagaggatgacaagtccatgagctccaaacacagc
atgcagtacctggaccagcctcaactctccaagagaacagctagtgccatcagtgtgctc
actgccacgatggaggatattgaagatgctcagaggccttgtcccccaggctggtataaa
ttcgctgatattttccttaaatgggactgctgggctccctgggtcatctttaagaactgg
gttcattttgtagtgatggacccatttgtcgatctaggtatcaccatctgcattgtgctc
aacacgcttttcatggccatggagcactaccccatgagtccggatttcgaacatgttctc
tcagtgggcaacttggtatttacaggaatcttcacagctgaaatggtgttcaagcttatt
gctttggacccctactactacttccaggtgggctggaacatttttgacagcatcattgtc
acactcagtctggtagagttgggactggccaatgttcagggattgtccgttctcaggtcc
ttccgtttgctacgtgtcttcaaactcgctaaatcttggcccacccttagcatgctgatc
aagatcatcggcaactcagtaggtgccctggggaacctaacgcttgtcctggccatcatc
gtcttcatcttcgccgtggtgggcatgcaactctttggcaagagctacaaggactgtgtt
tgtaagatctctcaggactgcgagcttccccgctggcacatgaacgacttcttccactcg
tttctcatcgtcttccggatcttgtgtggagagtggatcgagaccatgtgggactgcatg
gaggtggcgggagcaaacatgtgtttgatagtcttcatgatggtcatggtcattggaaac
cttgtggtgctgaatctgttcctggccctgctgctcagctccttcagtggggataacctg
tctggaggtgatgacgatggtgagatgaacaaccttcagatcgccattggtcgcatcacc
aggggtatggattggctcaaagccttcgtcgccagtgtggtgggacagattctaggaaag
aaacctcctggtaataatgagggagaagtggaaggagacatagaactatatgcttttaac
cacatggatgaggggaaaatggcagatggcttgaccaactctttgtctccaacactgact
gtgcccattgctcgttttgagtccgatgttgaagaggactcctatgaatcttctgatgag
gaggacagaaaggccactcttaatgatgacgactcttcggtttgtagcacagtggactac
cgacctccagaacctgagcctgagcccgaagaggaagaagaacctgagcctgaagagcca
gagtcctgtttcacagagggttgtgttaagcgatgtaaatgtttgactgtagacatcact
gaaggatgggggaaaaagtggtggaacctgcgaaaaacatgcttcaccatcgttgagcat
gactactttgagaccttcgtcatctttatgatcctccttagcagtggagcactggctttt
gaggatatcaacattgagcgccgcagagtgatcaagatcatcctggagtatgctgataaa
gtctttacatacattttcattgtggagatgttactgaagtgggtggcatacggtttcaag
acctacttcactaatgcatggtgctggctggacttcctcattgtggatgtttctctggtc
agtttaacagccaatttgatgggctattctgatctgggaccaatcaaatctctcagaaca
cttagggctcttcgaccccttcgagctctgtcgagatttgagggaatgagggtggtggtg
aacgcactggttggtgcaattccctccatttttaatgtgctcctggtgtgtctgatattc
tggctcatcttcagcattatgggagtcaatctatttgctggaaagttctaccactgcatc
aacaccaccacagaggaacgctttcccatggatgtggtcaacaacaggagtgactgcatg
gcactgatgcacaccaatgaggcgcgctgggttaatgtcaaggtcaactatgacaacgtg
ggtcttggctacctctctctactgcaaattgccacattcaaaggctggatggatatcatg
tatgctgcagtggattctagagaggtggaagagcagccatcatatgagatcaacctttac
atgtacctatattttgttattttcatcatttttggctcctttttcactctcaacctcttc
attggtgtcatcattgacaactttaatcagcaaaagtcaaagtttggagggaaagacctt
ttcatgacagaggaacagaaaaagtactacaatgccatgaagaagttgggttccaaaaaa
cctgcaaaaccaatccctcggccttcgaatattatcctgggcttggtgtttgacttcatc
acaaaacagttctttgacatctttatcatggtgcttatctgcctcaatatggtgacaatg
atgatagagacagatgaccagagtactgagaaagaggatatcctgtacctgatcaatttg
gtgttcatcatcatcttctcaggggaatgcatacttaagatgtttgcgctcagacagtac
ttcttcactattggctggaatgtctttgattttgttgtggtcatcctttctgtagcaggt
ctgatgttatcggacatcattgagaagtactttgtgtctcccaccttgttccgtgtcatc
cgacttgctaggatcggccgtgtgctacgtctcatcagaggtgcgaaaggcattaggact
cttttgtttgccttgatgatgtcacttcctgccctcttcaacattggactgcttctgttc
ctcatcatgttcatcttctcaatttttggcatgtctaactttgcctatgtgaaaaagcaa
gcaggcatcgatgacatcttcaactttgaaacatttggcggtagcatcatctgtctgttt
gagatcacaacctcggcaggctgggatgggcttctgctgcctatcatgaacagccctcca
gattgtgaccctgacatagagaaccctggtacagatgttcgggggaactgcgggaatcct
ggcatgggcatcatgtttttctgcagttacataatcatgtcgttcctggtggttgtgaac
atgtacattgccatcattcttgagaacttcaatgttgctcaagaggagagtggagaccca
ctctgcgaggatgactttacgatgtttgacgagacatgggaaaagtttgacgttgatgct
acacagttcatcgaatacaaccgcttgtttgactttgtcgataccttgcaggaacctctg
cgaattgccaaacccaaccgcctcaaactaatcaccatggatctgcccattgtaaccgga
gacaaaatccactgtttggatattcttctggcagttacccgcgaggttctcggcgacacc
atcgagatggctgccatgaaggagagcattgaagccaagttcataatgaacaaccccaca
tctgcctcatttgagccaatcaccaccactctcaggaggaaggaggaagagcgagcagcc
attgcggttcaacgaacataccgtagacatctcctcaaacgtgctatccgccatgcctgc
tttatgcgtcgcttaaagagaaaagttagtagtcaggccgatgaagaacctcttgaaacc
caagggctaattgcaaggaaaatggatgccttgtatggtagcaacccagaacttgccatg
gctcttgagttacaggctaggcctatgccgtctaatgaacagccacctgagcccacctcg
gtcccgcaacatggagcatcagtgacctaccctcgaccgcagggacaactcataatccca
gtggagttcacaagggaggtgattctccgatctgcacccacagtgcatggcctgtgcagt
tcagagaatgcaacattaaaagagtcaatagtataa
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integrated database retrieval system
