Phoxinus phoxinus (Eurasian minnow): 307010557
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Entry
307010557 CDS
T12064
Symbol
LOC307010557
Name
(RefSeq) sodium channel protein type 4 subunit alpha B-like
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
pphx Phoxinus phoxinus (Eurasian minnow)
Brite
KEGG Orthology (KO) [BR:
pphx00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pphx04040
]
307010557 (LOC307010557)
Ion channels [BR:
pphx04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
307010557 (LOC307010557)
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
307010557
NCBI-ProteinID:
XP_079491470
LinkDB
All DBs
Position
1:complement(21405713..21451935)
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AA seq
1781 aa
AA seq
DB search
MARLLPHTGIDVFRPFTLESLAEIERRMAEEAAEQEQMKAQNIEVAEEDLPKPSSDLEAG
KSLPFIYGDPPAKLLNVPIEELDPFYKAQKTFIVVTKGKTIFRFNAEPACYILSPFNPVR
RVAIRILIHSSFILFIMLTILSNCAFMTLSNPPSWSKTVEYVFTGIYTFEALVKVLSRGF
CKGHFTFLRDPWNWLDFMVISMAYVTEFVDLGNVSALRTFRVLRALKTITVIPGLKTIVG
ALIQSVKKLADVMILTVFCLSVFALIGLQLFMGNLRQKCVKWPPLGWNYTDNLTMLFNHT
DVNGTEAAYSFFNYKEYIEREENYYYVPGHMDALLCGNSSDAGRCPEGFVCLKAGRNPNY
GYTSYDTFAWAFLSLFRLMTQDFWENLFQLTLRAAGKTYMIFFVVIIFLGSFYLINLILA
VVAMAYAEQNEATFAEAKEKEEEYAKILEQLKKQAEQKNGVVNGSKTSLSSKKKGDDDQI
QSDYDGIALKPLSKSNGSKGSMNQVPDSQMRKVSAVNATDNALDELEDNQRACPPCWYKF
ADIFLKWNCCSPWVKFKKIVYLFVMDPFVDLGITICIVLNTMFMAMEHYPMTESFENMLS
VGNLVFTGIFAAEMVLKLIALDPYNYFQVGWNIFDSIIVTMSLVELFLADVEGLSVLRSF
RLMRVFKLAKSWPTLNMLIRIIGDSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVC
KISVDCELPRWHMTDFFHSFLIIFRILCGEWIETMWDCMEVADQGMCIVVFMMVMVIGNL
VVLNLFLALLLSSFSGDNLSASDDDGEMNNLQIAISRMTRGIDWVKAFVIGHARQCLGLM
PKEEGANVNKEGDSKMATMNSSLSVIKVPIANGESDYEDGNSSSEDEDKGGVDNNSKKNY
GDESSTCSTVDKPPEVEELEVVEEEDSTFPEDCYTENCIRRCPFLELDVSQGKRKAWWNL
RKACYAIVEHSYFETFIIFMILLSSGALAFEDIYIEQRRMIKIILEYADQVFTYVFVIEM
LLKWVAYGFKVYFTNAWCWLDFLIVDVSLISLTANILGYSELGAIKSLRTLRALRPLRAL
SRFEGMRVVVNALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFFYCFNATSESIIHT
SVVNNKTECFMLMENGSDVRWRNMKVNFDNVGMGYLSLLQVATFKGWMDIMYSAVDSRDV
EDQPEYESNLYMYIFFVIFIIFGSFFTLNLFIGVIIDNFNQQKAKLGGTDIFMTEEQKKY
YNAMKKLGSKKPQKPIPRPTNCFQGLVFDLVTKQFFDIFIMVMICLNMVTMMVETDDQSL
EMENILFLINFIFIVLFTGECTLKIIALRYHYFSVGWNIFDFVVVILSISGLLLADLIEK
YFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIF
GMSNFAYVKKEAGIDDMFNFETLGNSIICLFMITTSAGWDGLLSPILDTPPNCDPNVEHP
GTHVRGNCGSPAVGIVFFCSYIVMSFLVVVNMYIAIILENFNVATEESGDPLCEDDFEMF
YETWEKFDPSASQFIAYSRLSEFCDTLKDPLRIPKPNTLKLITMDLPMVPGDKIHCLDIL
LALTTEVLGDSGQMDAMKGTMEEKFMANNPSKVSYEPITSTLRRKQEEVAASTIQKAYRS
HVLKRCLKHASYMYREKTDSKRREEAPENEGMIANKMRYLYGNQAIEDNNPVGFSFSQHG
ETQHGAKRPPVKVQSDVVLHSAPFPVPDSSSAAKNLKESIV
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcctactccctcacactggcatcgatgtcttccgccccttcactttggagtcg
ctcgccgagatcgagcggcggatggcagaagaagccgccgagcaggaacagatgaaggcc
cagaatatcgaggtggctgaagaagatctgcccaaacccagcagtgatttggaagcagga
aagtccttgccgttcatctatggagaccctccagcaaagctcctcaatgttcctattgaa
gagttggatccattctacaaagcacaaaaaactttcatcgtggtcaccaaagggaaaaca
atattcagattcaatgctgaacctgcctgctacattctaagtcccttcaaccctgttcga
cgagtagccataagaatactcatacattcatcctttatcttgttcatcatgttaaccatc
ttatcaaactgtgctttcatgacactgagtaaccctccatcctggagcaaaacagtagag
tacgtttttactggcatctatacctttgaggcattggtaaaggtgctgtccagaggcttc
tgcaagggtcatttcacattcctacgagacccgtggaattggctggatttcatggtcatc
agcatggcgtacgtcacagagtttgtggacttggggaatgtatccgctctgaggactttc
cgtgttcttcgcgccctgaaaacaattactgtaattccaggtctaaaaaccattgttggc
gccctgattcagtcggtgaagaaactggcggatgtcatgatcctcaccgtcttctgtctc
agcgtgtttgctctcattggcctgcaactgttcatgggaaatttgcggcaaaaatgtgtc
aaatggcctccacttggctggaactacactgacaacctgaccatgctcttcaatcacaca
gacgtcaatggcactgaagctgcctatagctttttcaactacaaggaatatattgaaaga
gaagaaaactactactatgtacctggccatatggatgctttactctgtgggaacagctct
gatgcagggaggtgccctgaggggttcgtatgcctgaaagctggccgaaacccaaattat
ggctacactagttatgacacctttgcatgggctttcttatcccttttccggctaatgact
caagacttctgggagaacttgttccagttgacgctccgtgcagcagggaagacgtatatg
atcttctttgtagtcatcatcttcttgggttcgttctacctcatcaatctgattctggct
gtggtggccatggcatatgctgaacagaatgaagccacctttgcagaagctaaagaaaag
gaggaagagtatgcaaaaatcctggagcagctcaagaaacaagctgagcagaagaacggg
gtggtaaatggcagcaagacatcactatccagcaaaaagaaaggtgatgatgaccaaatt
cagagcgactatgatgggatcgcactgaaacccctttctaaatcgaatggatccaaaggt
agcatgaatcaagtccctgactctcagatgagaaaagtgagtgcagtgaatgctacagac
aatgctttagatgagctggaagataatcaaagggcttgtcctccctgctggtacaagttt
gctgacatattcctgaaatggaattgctgctctccatgggtgaaatttaagaagatcgtc
tacctatttgtaatggacccttttgtggatctgggcatcaccatctgcattgtgctcaac
acaatgttcatggctatggagcactatcccatgactgagagttttgaaaacatgttgtcg
gtgggaaacctggttttcacaggtatcttcgcagcagaaatggtgctaaaacttattgca
ctggacccttataattactttcaggttggctggaacatttttgacagcataattgtaacc
atgagcctcgtggagttgttcttagccgatgttgagggcttgtctgtgctaaggtccttc
cgtctgatgcgtgtgttcaagctagcaaagtcttggccaaccctaaacatgctgataagg
atcatcggtgattctgtgggtgctcttggaaacctgacccttgtcctggccattattgtc
ttcatctttgctgtggtggggatgcagcttttcggaaagagctacaaggactgtgtgtgt
aagatctcagtggattgtgagctccctcgctggcacatgacagatttctttcactcattc
ctcatcatctttcgtattctatgtggggaatggatcgaaacaatgtgggactgcatggag
gtggctgaccaaggcatgtgcatcgttgtcttcatgatggtcatggttataggaaaccta
gtggtgttgaatctcttcctggctctgctgctcagttccttcagcggggacaacctgtca
gcgtctgatgatgatggggagatgaacaatctgcagattgccatttctagaatgacaaga
ggcattgactgggtaaaggccttcgttatcggacatgcaagacaatgtctgggcctgatg
ccaaaggaagagggtgcgaacgtaaacaaagagggagattctaaaatggccaccatgaat
tccagtctgtccgttatcaaagtgcctatagccaatggtgaatcggattatgaggatggc
aacagctcttctgaggatgaagacaaaggcggcgtcgataacaattctaaaaagaactat
ggagatgaatcgtcaacctgcagcactgtggacaaacctcctgaggtagaagaattagaa
gtggtggaagaagaggattccaccttccctgaggactgctacacagagaactgcatcaga
cgatgtcctttcttggagcttgacgttagccagggtaaaaggaaggcatggtggaactta
cgtaaagcctgctacgccattgtggagcacagctattttgaaaccttcattatcttcatg
attctcctcagcagtggagctttggcatttgaggacatatacattgaacaacggagaatg
attaaaatcatccttgaatatgcagatcaggttttcacctatgtgtttgtcattgagatg
cttctgaaatgggtagcctatggtttcaaggtctatttcacaaacgcatggtgttggctg
gactttctcatcgttgatgtgtccctgatcagtttgactgcaaatatcttaggctactct
gaactgggggccattaagtctctcaggactttgagagcgctaagacctcttcgagctctc
tccaggtttgaaggaatgagggtggtggtgaatgccctggtgggggccatcccctccatc
ttcaacgttctcctggtgtgcctaatcttttggctcatcttcagcatcatgggagtcaac
ctttttgctggaaaattcttctactgcttcaacgcaacatccgagtcaattatccatacc
agtgtggtcaacaataagactgaatgctttatgctcatggaaaatggatcagatgtgcga
tggaggaatatgaaggtcaacttcgataacgtaggcatgggctacctctccttactgcaa
gtggcaacatttaaaggatggatggacatcatgtatagtgctgtggattcccgtgacgtg
gaggatcagccagaatatgagtcaaatctctacatgtacattttctttgtgatcttcatc
atttttggctctttcttcaccctcaatctattcattggtgtcatcattgacaatttcaac
caacaaaaggcaaagttaggaggaacagacatcttcatgacagaagagcagaaaaaatac
tacaatgccatgaagaaacttggctccaaaaagccacagaaaccgattccaaggcctacg
aactgcttccaaggcttggtattcgacctggtcaccaagcaattttttgacatcttcatt
atggtcatgatctgcctgaacatggtgaccatgatggtggagacggatgaccagagtttg
gagatggaaaatattctgttcttgatcaactttatcttcatcgtgctcttcaccggggag
tgcactctcaagatcatcgccctgcgctatcactacttctccgttgggtggaacattttt
gattttgtggtggtcattctttcaatctcgggtcttttgctggcagacctcatcgagaag
tactttgtgtcacctacgctgttccgagtcatccgactggccagaatcggccgtgtcctg
cgtctcatccgtggtgcgaaaggaatcaggacgttactgtttgcgctgatgatgtcgcta
cctgccctcttcaacattggcctccttttattcttaatcatgttcattttctccatattt
ggcatgtccaactttgcgtatgtgaaaaaagaagcaggcatcgatgacatgtttaatttc
gagaccttggggaacagtatcatatgcttgttcatgatcacaacgtctgccggctgggat
ggactgttgtctcctattctcgacactccaccaaactgtgacccgaatgtggagcacccg
ggaacgcatgttcgaggaaactgtgggagccccgcggtgggcatcgtcttcttctgcagc
tacattgtcatgtcgttcctcgtcgtggtcaacatgtacatagccattatcctggaaaat
ttcaacgtagcgacagaagaaagcggcgaccccttgtgcgaggacgacttcgagatgttc
tatgaaacctgggagaaatttgacccctctgcttctcagttcatcgcttatagtagactg
tctgaattctgcgacacgctaaaagaccccttgagaatcccaaaaccaaatacattgaag
ttgatcacaatggaccttcccatggtccctggtgataagatccactgtctggacatcctc
ctggccctcactacagaggtgctgggtgattctggccagatggatgccatgaaaggaact
atggaggagaagttcatggcaaacaacccctcaaaggtttcgtacgagcccatcaccagc
actctcagacgtaagcaagaagaagtggctgcttcgaccatccaaaaagcctaccgctca
cacgtcctcaaacgctgcctcaaacacgcttcgtatatgtacagagagaagacagactcg
aagagacgagaagaggctccggagaacgaagggatgatcgctaacaaaatgaggtatctt
tatggaaatcaagccattgaggacaacaatcctgtgggtttctctttctctcaacatggg
gaaacacagcatggggctaagcgccccccagtgaaggttcagagcgacgtggtcttgcac
tctgccccttttcccgttcctgactcctcaagtgctgcgaaaaacttgaaggagtcaatt
gtgtag
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integrated database retrieval system
