KEGG   Pseudomonas putida ND6: YSA_01079
Entry
YSA_01079         CDS       T02170                                 
Name
(GenBank) B12-dependent methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
ppi  Pseudomonas putida ND6
Pathway
ppi00270  Cysteine and methionine metabolism
ppi00450  Selenocompound metabolism
ppi00670  One carbon pool by folate
ppi01100  Metabolic pathways
ppi01110  Biosynthesis of secondary metabolites
ppi01230  Biosynthesis of amino acids
ppi04980  Cobalamin transport and metabolism
ppi04981  Folate transport and metabolism
Module
ppi_M00017  Methionine biosynthesis, aspartate => homoserine => methionine
Brite
KEGG Orthology (KO) [BR:ppi00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    YSA_01079
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    YSA_01079
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    YSA_01079
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    YSA_01079
   04980 Cobalamin transport and metabolism
    YSA_01079
Enzymes [BR:ppi01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     YSA_01079
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding CdhD MtrH
Other DBs
NCBI-ProteinID: AFK67367
UniProt: I3UPE6
LinkDB
Position
548657..552364
AA seq 1235 aa
MSDRSARLQALQNALKERILILDGGMGTMIQSYRLEEHDYRGTRFADWPSDVKGNNDLLL
LSRPDVIAAIEKAYLDAGADILETNTFNATQISQADYGMESLVYELNVEGARIARQVADA
KTLETPDKPRFVAGVLGPTSRTCSISPDVNDPGFRNVTFDELVENYIEATRGLIEGGADL
ILIETIFDTLNAKAAIFAVQQVFEDDNVELPIMISGTITDASGRTLSGQTTEAFWNSVRH
AKPISVGLNCALGAKDLRPYLEELATKADTHVSAHPNAGLPNAFGEYDETPAEMAAVVEE
FAASGFLNIIGGCCGTTPGHIQAIAEAVAKYKPREIPEIAKACRLSGLEPFTIDRQSLFV
NVGERTNITGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSQAAMVRFL
NLIAGEPDISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKHHARLCKRYG
AAVVVMAFDEVGQADTAARKKEICQRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNN
YAVDFIEACAYIRDHLPHALSSGGVSNVSFSFRGNNPVREAIHSVFLYHAIQNGLTMGIV
NAGQLEIYDEIPAQLREKVEDVVLNRTPHGTDALLAIADDYKGGGATKEVENEEWRSLPV
EKRLEHALVKGITAFIVEDTEACRQQCARPIEVIEGPLMNGMNVVGDLFGAGKMFLPQVV
KSARVMKQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIV
DLGVMVPAEKILQTAREQKCDIIGLSGLITPSLDEMVHVAREMQRQGFELPLMIGGATTS
KAHTAVKIEPKYSNDAVIYVTDASRAVGVATQLLSKELKPGFVEKTRLEYVDVRERTANR
SARTERLSYAQAIAAKPQYDWASYQPAVPSFTGVKVLEDIDLRTLAEYIDWTPFFISWDL
AGKFPRILTDEVVGEAATALYKDAREMLDKLIDEKLISARAVFGFWPANQVADDDIEVYG
EDGQALATLHHLRQQTIKPDGKPNWSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAY
QDKGDDYSSIMVKALADRLAEACAEWLHEQVRKEHWGYARDEHLDNEALIKEQYSGIRPA
PGYPACPDHTEKETLFRLLDGTAIGETGPSGVYLTEHFAMFPAAAVSGWYFAHPQAKYFA
VGKVDKDQIERYSARKGQDISVSERWLAPNLGYDS
NT seq 3708 nt   +upstreamnt  +downstreamnt
atgtccgaccgcagcgctcgtctccaagcactccagaacgcactcaaagagcgcatcctg
atcctcgacggcggcatgggtactatgatccaaagctaccgtctggaggaacacgactat
cgtggcacgcgttttgccgattggccaagcgatgtgaagggtaacaacgacttgttgctg
ctcagccgcccggacgtgatcgccgccatcgagaaggcctacctggatgccggtgccgat
attctcgaaaccaacaccttcaacgccacgcagatttcccaggccgactacggcatggag
tcgctggtttacgagctgaacgtcgaaggcgcgcgcatcgctcgccaggttgccgatgcc
aagaccctggaaacgccggacaagccgcgcttcgttgccggcgtgctcggccctaccagc
cgaacctgttcgatttccccggacgtcaacgaccctgggtttcgcaacgtcaccttcgac
gagttggtagaaaactacatcgaggccacccgcggcctgatcgaaggcggcgccgacctg
atcctgatcgaaaccatcttcgacaccctcaacgccaaggcggcgatattcgccgtgcag
caagtgttcgaggacgacaacgtcgaactgccgatcatgatctccggcaccatcaccgac
gcctccggccgtaccctgtcggggcagaccaccgaagcgttctggaactcggtgcgccac
gccaagccgatttccgtgggcctgaactgcgccctcggcgccaaggacctgcgcccgtat
ctggaagagctggccaccaaggccgacacccacgtgtccgcccaccccaacgcaggcctg
ccgaacgccttcggtgagtacgacgaaaccccggccgagatggccgcggtggtcgaagaa
ttcgccgccagcggtttcctcaacatcatcggcggttgctgcggcaccaccccaggccat
atccaggccattgccgaagccgtggccaagtacaagccgcgcgagatcccggaaatcgcc
aaggcctgccgcctgtcgggcctggagccgttcaccatcgaccgccagtcgctgttcgtc
aacgtcggtgagcgcaccaacatcaccggttccgccaaattcgcccggctgatccgcgaa
gagaactataccgaagccctggaagtcgccctgcagcaagtcgaggccggcgctcaggta
atcgacatcaacatggacgaagggatgctcgactcccaggcggccatggtccggttcctc
aacctgatcgcgggtgagccggacatctcgcgcgtaccgatcatgatcgactcgtccaag
tgggaagtgatcgaagccggcctcaagtgcatccagggcaagggcatcgtcaactccatt
tccatgaaggaaggcgtcgagcagttcaagcaccacgcccgcctgtgcaagcgctatggc
gctgccgtggtggtcatggccttcgacgaagtcggccaggccgacactgccgcgcgcaag
aaggaaatctgccagcgcagctatgacatcctggtcaacgaagtgggcttcccgccagaa
gacatcatcttcgacccgaacatcttcgccgtcgccaccggtatcgaagagcacaacaac
tacgccgtcgacttcatcgaagcctgtgcctatatccgcgatcacctgccccacgccctg
agctcgggtggcgtgtccaacgtgtcgttctcgttccgtggcaacaacccggtgcgtgag
gcgatccactcggtgttcctgtatcacgccatccagaacggcctgaccatgggtatcgtc
aacgccggccagctggagatctacgacgagatcccggcccagctgcgtgaaaaggtcgag
gacgtggtgctcaaccgcaccccacatggcaccgatgcactgctggccatcgccgacgac
tacaaaggtggcggcgcaaccaaggaagtggaaaacgaagagtggcgctcgctgccggtg
gaaaaacgcctggagcacgcgctggtcaagggcatcaccgcgttcatcgtcgaagacacc
gaagcatgccgccagcagtgcgcgcgccccatcgaagtgatcgaaggcccgctgatgaac
ggcatgaacgtggtcggcgacctgttcggcgcgggcaagatgttcctgccgcaggtggtc
aagtcggcccgcgtcatgaaacaggccgttgctcacctgatccccttcatcgaagccgaa
aaaggcgacaagccggaagccaagggcaagatcctgatggccacggtgaaaggcgacgtg
cacgacatcggcaagaacattgtcggcgtggtgctgggctgtaacggatacgacatcgtc
gaccttggcgtaatggtgccggcggagaagatcctgcagacagcccgcgagcagaagtgc
gacatcatcggcctgtccggcctgattaccccgtcgctggacgaaatggtccacgttgcc
cgcgaaatgcagcgccagggcttcgaactgccgctgatgatcggtggcgccaccacctcc
aaggcgcacacggcggtcaagatcgagcccaagtacagcaacgacgcagtcatctacgtc
accgacgcctcgcgcgcggtcggcgtggccacccagttgctgtccaaggaactcaagccg
ggcttcgtcgagaagacccgcctggaatacgtggacgtgcgcgagcgcaccgccaaccgc
agcgcccgcaccgagcgcctcagctacgcccaggcgatcgctgccaagccgcagtacgac
tgggccagctaccagccagcggtgccctccttcaccggcgtcaaggtgctggaagacatc
gatttgcggaccctggccgagtacatcgactggactccgttcttcatctcctgggacctg
gccggcaagttcccgcgcatcctcaccgacgaggtggttggcgaggctgctacggcgctg
tacaaggatgcccgcgagatgctcgacaagctgatcgacgagaagctgatcagcgcccgc
gcggtattcggcttctggccggccaaccaggtggccgatgacgacatcgaagtctacggc
gaagacggccaggcactggccaccctgcaccacctgcgccagcagaccatcaagccggac
ggcaagcccaactggtcgctggccgacttcgtcgcaccgaaagacagcggcgtgaccgac
tacgtaggtggttttatcaccaccgccggcatcggtgccgaggaagtggccaaggcttac
caggacaagggcgacgactacagctcgatcatggtcaaggccctggccgaccgcctggcc
gaagcctgtgccgaatggctgcacgagcaggtgcgtaaagagcactggggctatgcccgc
gacgaacacctggacaacgaggcgctgatcaaggagcagtacagcggcatccgccctgcg
ccgggctacccggcctgccccgaccacaccgaaaaggaaaccctgttccgcctgctcgat
ggcaccgccatcggtgagaccgggccaagcggggtgtacctcaccgagcacttcgcgatg
ttcccggcggcggcggtcagcggctggtacttcgcccacccgcaggcgaagtattttgcc
gtaggcaaggtcgacaaggaccagatcgaacgttacagcgcacgcaaaggccaggatatc
agcgtaagcgagcgctggctggcgcctaacctggggtatgacagctaa

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