Pseudomonas putida ND6: YSA_02885
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Entry
YSA_02885 CDS
T02170
Name
(GenBank) RND family efflux transporter MFP subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi01501
beta-Lactam resistance
ppi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
YSA_02885
01503 Cationic antimicrobial peptide (CAMP) resistance
YSA_02885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppi03036
]
YSA_02885
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppi02000
]
YSA_02885
01504 Antimicrobial resistance genes [BR:
ppi01504
]
YSA_02885
Chromosome and associated proteins [BR:
ppi03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
YSA_02885
Transporters [BR:
ppi02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
YSA_02885
Antimicrobial resistance genes [BR:
ppi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
YSA_02885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
Motif
Other DBs
NCBI-ProteinID:
AFK68335
UniProt:
I3US64
LinkDB
All DBs
Position
1560986..1562140
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AA seq
384 aa
AA seq
DB search
MQFKPAVTALVSAVALATLLSGCKKEEAAPAAQAPQVGVVTIQPQAFTLTSELPGRTSAY
RVAEVRPQVNGIILKRLFKEGSEVKEGQQLYQIDPAVYEATLANAKANLLATRSLAERYK
QLIDEQAVSKQEYDDANAKRLQAEASLKSAQIDLRYTKVLAPISGRIGRSSFTEGALVSN
GQTDAMATIQQLDPIYVDVTQSTAELLKLRRDLESGQLKKAGDNAASVQLVLEDGSLFKQ
EGRLEFSEVAVDETTGSVTLRALFPNPDHTLLPGMFVHARLKAGVNANAILAPQQGVTRD
LKGAPTALVVNQENKVELRQLKASRTLGSDWLIEEGLNPGDRLITEGLQYVRPGVEVKVS
DATNVKKPAGPDQANAAKADAKAE
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcaagccagccgttaccgctctggtttccgccgtcgccctggcaaccctgctc
agtggctgtaagaaagaagaagcagcgccagcggcgcaggctcctcaggtcggcgtcgtg
accatccagccgcaagccttcaccctcacctcggaattgccggggcgaaccagtgcctac
cgcgtcgccgaagtgcgcccgcaggtcaacggcatcatcctcaagcgcctgttcaaggaa
ggcagtgaggtcaaggaaggccagcagttgtatcagatcgaccctgccgtgtacgaagcc
accctggccaatgccaaggccaacctgctggctacacgctcactggccgaacgttacaag
caactgattgacgaacaggccgtctccaaacaggagtacgacgacgccaatgccaaacga
ttgcaggctgaggcttcgctcaagagcgcacagatcgacctgcgctacaccaaggttctg
gcgccaatcagcggccgtatcggtcgctcttcgttcaccgagggtgcactggtgagcaat
ggccagaccgacgccatggccaccatccagcagctcgatcctatttatgtcgacgttacc
cagtccaccgccgagctgctcaagctgcgccgtgacctggaaagcggccagctgaagaag
gccggcgacaacgccgcctcggttcaactggtactggaagacggcagcctgttcaagcag
gaaggccgcctggagttctccgaagtcgcggtggacgagaccaccggctcggtgaccctg
cgcgcgctgttccccaaccccgatcacaccctgctgccaggcatgttcgtgcatgcgcgg
ctcaaggccggggtcaacgccaacgccatcctggcaccgcaacaaggcgtgacccgcgac
ctcaaaggcgcacccaccgccctggtggtcaatcaggagaacaaggtcgaactgcgccag
ctcaaggccagccgtaccttgggtagcgactggctgatcgaggaaggcctcaacccgggt
gaccgcctgatcaccgaagggctgcagtacgtgcgcccaggcgtcgaggtgaaggtcagc
gatgccaccaacgtcaagaagccggccggccctgatcaggccaacgcggcgaaagcagac
gccaaagcggagtaa
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