Pseudomonas putida ND6: YSA_02998
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Entry
YSA_02998 CDS
T02170
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00300
Lysine biosynthesis
ppi00550
Peptidoglycan biosynthesis
ppi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YSA_02998
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YSA_02998
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppi01011
]
YSA_02998
Enzymes [BR:
ppi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
YSA_02998
Peptidoglycan biosynthesis and degradation proteins [BR:
ppi01011
]
Precursor biosynthesis
Amino acid ligase
YSA_02998
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
AFK68394
LinkDB
All DBs
Position
complement(1625627..1627117)
Genome browser
AA seq
496 aa
AA seq
DB search
MMTMPLSKLFAHASRDPLIRELTLDSRNVRPGDLFLAVPGAKVDGREHIADALARGAAAV
AYEEQGASVLPLTDAPLIPVKGLIAQLSDIAGRFYGEPSRQLNLVGVTGTNGKTSVTQLV
AQALDLLGQRCGLIGTLGTGFYGELQSGRLTTPDPIAVQSTLNDLKKGGAKAVAMEVSSH
ALEQGRVAALEFDIAVMTNLSRDHLDYHGSMEAYEAAKAKLFAWPSLRCQVVNLDDDFGR
RLAADFARRPSVDHIETRLLSYSLENPEASLFCREAVFSDDGVRATLVTAQGERILRSQL
LGRFNLSNMLAAVATLLALDYALDEILKVTPQLQGPVGRMQRLGGGDKPLVVVDYAHTPD
ALEKVLEALRPHAHGKLLCLFGCGGDRDRGKRPLMAEVAERLADRVLVTDDNPRTEDPSR
IFDDIRPGFTRPDDVEFVAGRGEAIAHLIATAAANDVIVLAGKGHEDYQEINGERHDFSD
LTEAEKALAAWEAPHA
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatgccactaagcaaacttttcgcccacgccagccgtgatccattgattcgt
gagctgaccctggacagccgtaatgtgcgcccgggtgacttgttcctggcggtgccgggt
gccaaggtcgatggccgcgagcatatcgccgatgccctggcccgtggcgctgccgccgtg
gcctacgaagagcagggtgccagcgtgctgccgctgaccgatgcgccgctgattccggtc
aaaggcctgatcgctcagctgtcagacatcgccgggcgcttctacggtgaaccgagccgc
cagttgaatctggtcggcgtgaccggtaccaacggcaagacaagcgtgacccaactggta
gcccaggcgctcgacctgcttggccagcgctgcggcctgattggcaccctggggaccggt
ttctacggcgagttgcagagcggccgtctgaccacgcccgacccgattgccgtgcaatcg
accctcaacgacctcaagaaaggcggcgccaaggccgtggccatggaagtgtcttcccat
gccctggagcaaggccgggttgccgcactggaattcgacatcgcggtgatgaccaacctg
tcccgcgaccacctcgactatcacggcagcatggaagcctatgaggccgccaaggccaag
ctgttcgcctggccgagcctgcgttgccaggtggtcaacctggatgacgactttggtcgt
cgtctggcggccgacttcgcgcgtcgcccgagtgtcgaccatatcgaaacccggctgctg
agctacagcctggaaaaccctgaagcctcgctgttctgccgcgaagccgtattcagtgac
gatggcgtgcgcgccaccctcgtcaccgcccaaggtgagcgtatcttgcgcagccaactg
ctgggtcgcttcaacctgagcaacatgcttgccgctgtggcgaccctgctggcgctggac
tatgcgctggacgagatcctcaaggtcacgccgcaactgcaggggccggtaggccgcatg
cagcgcctgggtggcggcgacaagccgctggtggtggtcgactatgcacacacgccggat
gcacttgaaaaagtactcgaggccctgcgcccgcacgctcatggcaagctgttgtgcctg
ttcggctgcggcggggaccgtgatcgcggcaagcgcccgctgatggccgaagtggccgag
cgcctggccgaccgtgtactggtcaccgacgacaacccgcgcactgaagatccgtcgcgc
atcttcgatgacattcgccccggtttcaccaggcctgacgacgtcgagttcgtcgccggg
cgtggcgaagccattgcgcacctgattgccaccgccgcagccaacgatgtgatcgtgctg
gccggcaaggggcacgaggattaccaggagatcaatggcgagcgccatgatttctccgat
ttgaccgaagccgaaaaggcacttgcagcctgggaggctccacatgcttaa
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