Pseudomonas putida ND6: YSA_07532
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Entry
YSA_07532 CDS
T02170
Name
(GenBank) radical SAM domain protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00790
Folate biosynthesis
ppi01100
Metabolic pathways
Module
ppi_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
YSA_07532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppi03016
]
YSA_07532
Enzymes [BR:
ppi01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
YSA_07532
Transfer RNA biogenesis [BR:
ppi03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
YSA_07532
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Motif
Other DBs
NCBI-ProteinID:
AFK70834
UniProt:
I3UZB3
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All DBs
Position
4078426..4079073
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AA seq
215 aa
AA seq
DB search
MQDTLRITEVFYSLQGETRTAGLPTVFVRLTGCPLRCQYCDSAYAFSGGTVRTLDSILEQ
VAGFKPRYVCVTGGEPLAQPNALPLLQRLCDAGYEVSLETSGALDIAGTDTRVSRVVDLK
TPGSEESHRNRYENIEQLTRNDQVKFVICSREDYDWAVSKLIQYNLAERAGEVLFSPSHH
QVNASDLADWIVADNLPVRFQLQLHKLLWNDEPGR
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacacattacgcatcaccgaagtcttttactctttgcagggtgagacgcgaacg
gccgggctgcctacggtatttgtgcgcctcaccggttgccccctgcgttgccagtactgc
gacagtgcctatgccttcagtggcggtaccgttcgcacccttgattcgatccttgagcag
gtcgccggcttcaagccgcgctacgtctgtgtcaccggtggcgaaccactggcccagccc
aacgccttgccgttgctgcagcggctgtgtgacgctggttacgaggtgtcgctggaaacc
agcggcgcgctggatattgccggcaccgacacccgcgtcagccgtgtggtcgacctgaaa
accccaggctccgaagagtcgcaccgtaaccgctacgagaacatcgagcagttgacgcgt
aacgaccaggtcaagttcgtcatttgttcccgtgaggattatgactgggcggtatccaag
ctgatccagtacaacctggcagagcgtgccggtgaggtgttgttctcacccagccatcat
caggtgaacgccagtgacctggctgactggatcgttgctgacaacctgcctgtacgcttc
caactgcagctgcacaagctgctgtggaacgacgagcccggacgttga
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