Pseudomonas putida ND6: YSA_08441
Help
Entry
YSA_08441 CDS
T02170
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
ppi
Pseudomonas putida ND6
Pathway
ppi00020
Citrate cycle (TCA cycle)
ppi00785
Lipoic acid metabolism
ppi01100
Metabolic pathways
ppi01110
Biosynthesis of secondary metabolites
ppi01120
Microbial metabolism in diverse environments
ppi01200
Carbon metabolism
ppi01210
2-Oxocarboxylic acid metabolism
Module
ppi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ppi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YSA_08441
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
YSA_08441
Enzymes [BR:
ppi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
YSA_08441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OxoGdeHyase_C
Transket_pyr
E1_dh
2-oxogl_dehyd_N
PFOR_II
Motif
Other DBs
NCBI-ProteinID:
AFK71336
UniProt:
I3V0R5
LinkDB
All DBs
Position
4553686..4556517
Genome browser
AA seq
943 aa
AA seq
DB search
MQESVMQRMWDSAHLSGGNAAYVEELYELYLHDPNAVPEEWRTYFQKLPADGSTATDVSH
STIRDHFVLLAKNQRRAQPVSAGSVSSEHEKKQVEVLRLIQAYRMRGHQAAKLDPLGLWQ
RPAPVDLSINHYGLTNADLDTTFRAGDLFIGKEEASLRDIFDALQKTYCRTIGAEFTHIV
DSEQRSWFQQRLESVRGRPEFSADVQAHLLERVTAGEGLEKYLGTKYPGTKRFGLEGGES
LIPMLDEMIQRSGSYGAKEVVIGMAHRGRLNVLVNTFGKNPRELFDEFEGKKMNELGSGD
VKYHQGFSSNVMTPGGEVHLAMAFNPSHLEIVSPVVEGSVRARQDRRNDTIGDKVLPISI
HGDAAFAGQGVVMETFQMSQTRGFKTGGTVHIVINNQVGFTISNPLDARSTEYATDVAKM
IQAPILHVNGDDPEAVLFVTQLAIDYRMQFKRDVVIDLVCYRRRGHNEADEPNGTQPLMY
QQISKQRTTRELYAEQLIQAGRIDAERAQAKIDEYRNALDNGLHVVKSLVKEPNRELFVD
WRPYLGHAWTARHDTRFDLKTLQDLSAKLLELPEGFVVQRQVSKIYEDRQKMQAGGLPIN
WGYAETMAYATLQFEGHPIRMTGQDIGRGTFSHRHAVLHNQKDASTYIPLQNLFPGQPRF
DLYDSFLSEEAVLAFEYGYSTTMPNALVIWEAQFGDFANGAQVVIDQFITSGEHKWGRLC
GLTMLLPHGYEGQGPEHSSARLERYLQLCAEHNIQVCVPTTPAQIYHLLRRQVIRPLRKP
LVVLTPKSLLRHKLAISTLEDLAEGSFQTVIPEIDAIDPAKVERLVLCSGKVYYDLLEKR
RAEGREDIAILRIEQLYPFPEDDLVEILAPYTNLKHAVWCQEEPMNQGAWYSSQHHMRRI
LGRHNKALVLEYAGRDASAAPACGYASKHAEQQEKLLQDAFTV
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcgtgatgcagcgcatgtgggatagcgcccacctttcaggtggtaacgct
gcatatgtggaagagctctacgagctctacctgcacgaccctaacgctgtgccagaagag
tggcgcacttacttccagaagttgccagccgacggcagcaccgctactgatgtatcgcac
tcgacaatccgcgaccatttcgtactgctggcaaagaaccagcgccgcgctcaaccggtt
tccgccgggagcgtgagcagtgaacacgagaagaagcaggttgaagttctgcgactgatc
caggcctatcgtatgcgcggccatcaggctgccaagctcgacccgttggggttgtggcag
cgccctgcgcccgtagacctgtcgatcaatcactacggcttgaccaatgccgatcttgat
acgaccttccgtgccggcgacctgttcatcggcaaagaggaggcgagcctacgcgacatc
ttcgatgcactccagaagacatattgtcgcaccattggcgccgaattcacccacatcgtc
gattccgagcagcgcagctggttccagcagcgcctggaaagcgtgcgcggccgtccggag
ttttccgctgacgtgcaggcccacctgctcgagcgcgtgaccgccggtgagggcctggaa
aagtacctgggcaccaagtacccgggcaccaagcgtttcggccttgaaggcggcgagagc
ctgattccgatgctggatgaaatgatccagcgttccggctcttacggcgccaaggaggtc
gtgatcggcatggcccaccgtggccgcctgaacgtgctggtgaacaccttcggcaagaac
ccgcgcgagctgttcgacgagttcgaaggcaagaagatgaacgagctgggctccggtgac
gtgaagtatcaccagggcttctcctcgaacgtgatgaccccgggtggcgaagtgcacctg
gccatggcgttcaacccgtcccacctggaaatcgtttcgccggtggtcgagggttcggtg
cgcgcccgtcaggaccgccgcaacgacaccattggcgacaaggtgctgccgatctcgatc
cacggcgacgctgcgttcgctggccagggcgtggtcatggaaaccttccagatgtcgcag
acccgcggtttcaagaccggcggtaccgtgcacatcgtgatcaacaaccaggttggtttc
accatcagcaacccactggatgcgcgctccaccgagtacgcgactgacgttgccaagatg
atccaggcaccgatcctgcacgtgaacggcgatgacccggaagccgtgctgttcgtcacc
cagctggccatcgactaccgcatgcagttcaagcgtgacgtggtcatcgacctggtctgc
taccgtcgccgtggccacaacgaggctgacgagccgaacggcacccagccgctgatgtac
cagcaaatcagcaagcagcgcactacccgtgagctgtatgccgagcagctgatccaggcc
ggtcgcatcgacgccgagcgcgctcaggccaagatcgacgagtaccgcaacgcgctggac
aatggcctgcacgtggtgaaaagcctggtcaaggagccgaaccgcgagctgttcgtcgac
tggcgtccgtacctgggccatgcctggaccgcgcgtcacgacacccgtttcgacctcaag
accctgcaggatctgtcggccaagctgctcgagctgccggaaggtttcgtggtccagcgt
caggtgtcgaagatctacgaagaccgtcagaagatgcaggccggtggcttgccgatcaac
tggggttatgcagagaccatggcttacgccaccctgcagttcgaaggtcacccgatccgc
atgaccggccaggacatcggccgtggcaccttctcgcaccgtcacgcggtgctgcacaac
cagaaggacgccagcacctacattccgttgcagaacctgttccctggccagccacgtttc
gatctgtacgattcgttcctgtccgaggaagcggtactggccttcgaatacggctactcc
accaccatgccgaacgcgctggtgatctgggaagcccagttcggcgacttcgccaacggt
gcgcaagtggtgatcgaccagttcatcaccagtggtgagcacaagtggggccgcctgtgt
ggcctgaccatgctgctgccacacggctatgaagggcaggggccggagcactcctccgcg
cgtctggagcgttacctgcagctgtgcgccgagcacaacatccaggtctgcgtaccgacg
acgccggcacagatttaccacctgctgcgtcgccaggtcattcgcccgctgcgcaagccg
ctggtcgtcctgacgccgaagtcgctgctgcgccacaagctggccatctcgaccctggaa
gacctggcagaaggctcgttccagaccgtgatcccggaaatcgacgcaatcgatccggcc
aaggtcgagcgtctggtgctgtgcagcggcaaggtctactacgacctgctggaaaaacgc
cgtgccgaaggccgcgaagacatcgccatcctgcgtatcgagcagctgtatccgttccct
gaggacgatctggtcgaaatcctcgccccttacaccaacctcaagcatgcggtctggtgt
caggaagagccgatgaaccagggtgcctggtacagcagccagcaccacatgcgccgtatc
ctgggccgccacaacaaggcactggtcctggaatacgccggtcgcgacgcttctgccgcg
ccagcctgtggttacgcttcgaagcacgccgaacagcaggaaaaactgctgcaagacgcc
ttcactgtctaa
DBGET
integrated database retrieval system
