Pseudomonas putida ND6: YSA_11242
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Entry
YSA_11242 CDS
T02170
Name
(GenBank) transporter hydrophobe/amphiphile efflux-1 family
KO
K18299
multidrug efflux pump
Organism
ppi
Pseudomonas putida ND6
Module
ppi_M00641
Multidrug resistance, efflux pump MexEF-OprN
Brite
KEGG Orthology (KO) [BR:
ppi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppi02000
]
YSA_11242
01504 Antimicrobial resistance genes [BR:
ppi01504
]
YSA_11242
Transporters [BR:
ppi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
YSA_11242
Antimicrobial resistance genes [BR:
ppi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexEF-OprN [MD:
M00641
]
YSA_11242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
DUF5693
Motif
Other DBs
NCBI-ProteinID:
AFK72868
UniProt:
I3V547
LinkDB
All DBs
Position
6002274..6005453
Genome browser
AA seq
1059 aa
AA seq
DB search
MNFSKFFITRPIFAAVLSLVLLIAGSISLFQLPISEYPEVVPPTVVVRANFPGANPKVIG
ETVAAPLEQAITGVENMLYMSSQSTADGKLTLTITFALGTDLDNAQVQVQNRVTRTQPKL
PEEVTRIGITVDKASPDLTMVVHLTSPDNRYDMLYLSNYAILNIKDELARLGGVGDVQLF
GMGDYSLRVWLDPNKTASRNLTASDVVAAIREQNRQVAAGQLGAPPAPGSTSFQLSINTQ
GRLVNEEEFENIIIRAGADGEITRLKDIARVELGSSQYALRSLLNNQPAVAIPIFQRPGS
NAIEISDEVRAKMAELKKDFPEGMDYSIVYDPTIFVRGSIEAVVHTLFEALVLVVLVVIL
FLQTWRASIIPLLAVPVSLIGTFAVMHLFGFSLNALSLFGLVLAIGIVVDDAIVVVENVE
RNIGLGLKPLEATQKAMSEVTGPIIATALVLCAVFVPAAFISGLTGQFYKQFALTIAIST
VISAFNSLTLSPALAAVLLKDHHAPKDRFSRFLDKLLGSWLFSPFNRFFDRASHSYVGGV
RRVIRSSGIALFVYAGLMGLTYLGFSSTPTGFVPAQDKQYLVAFAQLPDAASLDRTEAVI
KRMSEIALKQPGVADSVAFPGLSINGFTNSPNSGIVFTPLKPFDERKDPSQSAAAIAAAL
NAQFADIQDAYIAIFPPPPVQGLGTIGGFRLQIEDRGNLGYEALYKETQNIIAKSHNVPE
LAGLFTSYQVNVPQVDAAIDREKAKTHGVAITDIFDTLQVYLGSLYTNDFNRFGRTYQVN
VQAEQQFRLDAEQIGQLKVRNNLGEMIPLATFLKVSDTSGPDRVMHYNGFITAEINGAAA
PGYSSGQAEAAIEKLLKEELPNGMTFEWTDLTYQQILSGNTALLVFPLCVLLAFLVLAAQ
YESWSLPLAVILIVPMTLLSAITGVIVSGGDNNIFTQIGLIVLVGLACKNAILIVEFAKD
EQAKGLDPLAAVLEACRLRLRPILMTSIAFIMGVVPLVFSSGAGSEMRHAMGVAVFSGMI
GVTVFGLFLTPVFFFLIRRFVERRQARKAEHAQVLENHA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaacttctcgaaattcttcattacccggccgatcttcgccgcggtgctgtcgctggtg
ctgctgatcgcgggttccatctcgctgttccagctgccgatcagcgaataccccgaagtg
gtgccgcccaccgtggtggtgcgcgccaacttccccggcgccaaccccaaggtcatcggc
gaaaccgttgccgcgccactggagcaggccattaccggtgtggagaacatgctgtacatg
tcctcccagtccactgcggacggcaagctgacgctgaccatcaccttcgccctgggtacc
gacctggacaacgcccaggtgcaggtgcagaaccgcgtcacccgtacccagcccaagctg
cccgaggaagtgacccgaatcggtatcaccgtcgacaaggcctcgcctgacctgaccatg
gtcgtgcacctgacctcgccggacaaccgctacgacatgctctacctgtccaactacgcc
atcctcaacatcaaggacgagctggcgcgcctgggcggcgtaggcgacgtgcagctgttt
ggcatgggcgactactcgctgcgcgtctggctggacccgaacaagaccgcttcgcgcaac
ctgacagccagtgatgtggtcgcggcaatccgtgagcagaaccgccaggtggccgccggc
cagctgggcgcgccacctgccccaggttcgaccagcttccagctgtcgatcaatacccag
ggccgtctggtcaacgaggaagagttcgagaacatcatcatccgcgccggtgccgatggc
gagatcacccgcctgaaagacatcgcccgggtcgaactcggttccagccagtacgccctg
cgctcgctgctgaacaaccagccggcggtggccatcccgattttccagcgcccaggctcc
aacgccatcgagatctccgacgaagtgcgggcgaaaatggccgagcttaaaaaggacttc
ccggaagggatggactacagcatcgtctatgacccgaccatcttcgtgcgcggctccatc
gaagcagtggtgcacaccctgttcgaagccctggtgctggtggtgctggtggtgatcctg
ttcctgcagacctggcgcgcctcgatcatcccactgctggctgtgccagtctcgctgatc
ggtaccttcgcggtcatgcacctgttcggtttctcactcaacgcactgtcgttattcggg
ctggtgctcgccatcggtatcgtggtggacgatgccatcgtcgtggtggagaacgtcgaa
cgtaacatcgggctgggcctgaagccgctggaagccacgcaaaaagccatgagcgaagtg
accgggccgatcatcgccaccgccctggtgctgtgcgcggtgttcgtacctgcagcgttc
atttccggcctgaccgggcagttctacaagcagttcgccctgaccatcgccatctcgacc
gtcatttcggcgttcaactcgctgaccctgtcgccagccttggccgcggtgctgctcaag
gaccatcacgcacccaaggaccgtttctcgcggttcctcgacaagctgctgggcagctgg
ctgttctcccctttcaaccgcttcttcgaccgggccagccacagctacgtcggtggcgtg
cgccgcgtcatccgctccagcggcatcgccctgttcgtgtatgccggcctgatgggcctg
acctacctcggtttctcgtccacgccgaccggtttcgtgccggcccaggacaagcagtac
ctggtggccttcgcccaactgccggacgcggccagcctcgaccgtactgaagcggtgatc
aagcgcatgagcgaaatcgccctcaagcagcctggcgtggccgactcggtagccttcccg
ggcctgtcgatcaacggtttcaccaacagccctaacagcggcatcgtgttcaccccgctc
aagccattcgatgagcgcaaggacccgagccagtcggcggcagccatcgcagccgcgctg
aatgcccagttcgccgacatccaggacgcctacatcgccatcttcccaccgccgccggta
cagggcctgggcacgattggcggcttccgtctgcaaatcgaagaccgtggcaacctgggt
tacgaagcgctgtacaaggaaacccagaacatcatcgccaaaagccacaacgtcccagag
ctggcaggcctgttcaccagctaccaggtcaacgtgccacaagtcgatgccgccatcgac
cgggaaaaggccaagacccacggagtggcgatcaccgacatcttcgacaccctgcaggtt
tacctgggctcgctgtacaccaacgacttcaaccgctttggccgcacttaccaggtcaac
gtccaggccgagcagcagttccgccttgatgccgagcagatcggccaactgaaggtgcgc
aacaaccttggcgagatgatcccgctggcgaccttcctcaaggtcagcgacacctccggg
ccggaccgggtcatgcactacaacggcttcatcactgccgagatcaacggcgctgctgcc
ccgggctacagctctggtcaggcggaagctgcgatcgagaagctgctgaaagaggaactg
cccaacggcatgaccttcgagtggaccgacctgacctaccagcaaatcctctcgggcaat
accgcattgctggtgttcccgctgtgcgtgctgctggcgttcctggtgctggccgcccag
tacgaaagctggagcctgccgctggcggtgatcctgatcgtgccgatgaccctgctgtcg
gccatcaccggtgtgatcgtctcgggtggcgacaacaacatcttcacccagatcggcctg
atcgtactggtgggcctggcgtgcaagaacgcgatcctgatcgtcgagttcgccaaggac
gaacaggccaagggcctcgatccgctggctgcggtgctggaagcctgccgcctgcgtctg
cggccgatcctgatgacctcgatcgccttcatcatgggggtagtgcccctggtgttcagc
tccggtgctggttcggaaatgcgccatgccatgggtgtggcggtgttctcggggatgatc
ggcgtgaccgtgttcggcctgttcctgaccccggtgttcttcttcctgatccgccgtttc
gtcgagcgtcgccaggcccgcaaggctgaacacgctcaagtgctggagaaccatgcatga
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