Phaeobacter piscinae: PhaeoP14_02820
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Entry
PhaeoP14_02820 CDS
T05105
Name
(GenBank) putative citrate lyase subunit beta
KO
K08691
malyl-CoA/(S)-citramalyl-CoA lyase [EC:
4.1.3.24
4.1.3.25
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00630
Glyoxylate and dicarboxylate metabolism
ppic00660
C5-Branched dibasic acid metabolism
ppic00680
Methane metabolism
ppic00720
Other carbon fixation pathways
ppic01100
Metabolic pathways
ppic01120
Microbial metabolism in diverse environments
ppic01200
Carbon metabolism
Module
ppic_M00373
Ethylmalonyl pathway
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PhaeoP14_02820
00660 C5-Branched dibasic acid metabolism
PhaeoP14_02820
09102 Energy metabolism
00720 Other carbon fixation pathways
PhaeoP14_02820
00680 Methane metabolism
PhaeoP14_02820
Enzymes [BR:
ppic01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.24 malyl-CoA lyase
PhaeoP14_02820
4.1.3.25 (S)-citramalyl-CoA lyase
PhaeoP14_02820
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HpcH_HpaI
C-C_Bond_Lyase
DUF6986
Motif
Other DBs
NCBI-ProteinID:
ATG40873
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All DBs
Position
2972447..2973409
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AA seq
320 aa
AA seq
DB search
MSFRIQPAAPARPNRCQLFGPGSNTKLFPKMAASAADVINLDLEDSVAPSDKDAARANVI
EALNTVDWGNKYISVRINGLDTPYWYRDVVDLLEQAGDRLDQIMIPKVGCAEDVYAVDAL
VTAIERAKGRTKPISFEVIIESAAGIAHVEAIAAASPRLQAMSLGAADFAASMGMQTTGI
GGTQEDYYMLRAGEKHWSDPWHWAQAAIVAACRTHGILPVDGPFGDFSDDEGYIAQAKRS
ATLGMVGKWAIHPKQIALANQVFTPSDEAVSEAREILAAMEQAKAKGEGATVYKGRLVDI
ASIKQAEVIVAQSELIAQNG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcgcatccaacccgccgccccggcccgcccgaaccgctgtcagctgtttggc
ccaggctccaacaccaaactctttccgaaaatggcagcctcagcagcggatgtgatcaac
ctcgacctagaggattcggtcgccccgtcggataaggatgcagcccgtgccaatgtgatc
gaggccctgaacacggtcgactggggcaacaaatatatctccgtgcggatcaatgggctg
gatacaccctattggtaccgcgatgttgtcgatctcctggagcaggctggtgaccggctg
gaccagatcatgatccccaaagtgggctgcgccgaagatgtctatgctgttgacgcctta
gtcaccgcgattgaacgcgccaagggccgaacaaaaccgatatcctttgaggtgatcatc
gaatcggccgccggcatcgcccatgttgaggccatcgccgccgccagcccgcgccttcag
gccatgagcctcggggctgcagacttcgccgcctccatgggcatgcagaccaccggcatc
ggcggcacgcaggaggattactatatgctgcgcgctggcgaaaaacactggtcggacccc
tggcattgggcccaggccgccattgtcgccgcctgtcgcacccatggcattctgccagtg
gatggcccgtttggggatttctccgatgatgagggctatatcgcccaggccaaacgctcc
gccaccctcggcatggtgggcaaatgggcgatccacccgaaacagatcgcgttggccaat
caggttttcaccccatctgatgaagcagtctctgaggcgcgtgagatcctcgcagccatg
gaacaagccaaggccaaaggcgaaggcgcaacagtctacaagggccgtctggtcgatatc
gcctctatcaaacaagccgaggtgatcgtcgcgcaatcggagctgatcgcccaaaacggc
taa
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integrated database retrieval system
