Phaeobacter piscinae: PhaeoP14_02967
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Entry
PhaeoP14_02967 CDS
T05105
Symbol
patB
Name
(GenBank) cystathionine beta-lyase PatB
KO
K14155
cysteine-S-conjugate beta-lyase [EC:
4.4.1.13
]
Organism
ppic
Phaeobacter piscinae
Pathway
ppic00270
Cysteine and methionine metabolism
ppic00450
Selenocompound metabolism
ppic01100
Metabolic pathways
ppic01110
Biosynthesis of secondary metabolites
ppic01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
ppic00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
PhaeoP14_02967 (patB)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
PhaeoP14_02967 (patB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppic01007
]
PhaeoP14_02967 (patB)
Enzymes [BR:
ppic01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.13 cysteine-S-conjugate beta-lyase
PhaeoP14_02967 (patB)
Amino acid related enzymes [BR:
ppic01007
]
Aminotransferase (transaminase)
Class II
PhaeoP14_02967 (patB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
DUF3772
NIR_SIR_ferr
Motif
Other DBs
NCBI-ProteinID:
ATG41017
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All DBs
Position
3103463..3104635
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AA seq
390 aa
AA seq
DB search
MDFDKIIDRRNTHCIKWDMMEDLYNVPRDEGLSMWVADMDFAVPSVVTDKMREMADHGVY
GYVNCDRPYKSAICWWMQNRHGWSVDPEAIFTTTGLVNGVGMCLDTYTQPGDGIVLFTPV
YHAFAKVIRNAGRDVVECELAVNDGRYEMDFAAYDAQMTGTEKMVILCSPHNPVGRVWTE
EELRGVADFAKRHDLILLSDEIHHDLVFDGATHIPMQNAAPDITDRLLMLTAPSKTFNFA
GMHTGQVIIPDPDLRAQFSRRMLALALSPNSPGQWATAAAYSPEGAAWVDELVPYLDGNR
QLFDAAVNEIPGLRSTRLEATYLAWVDFSGTGMSREEFTARVEQSAKIAANHGPSFGTGG
DTFLRFNLGTQRARVEEACERLRDAFSDLQ
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggattttgacaagatcattgaccgccggaacacacattgcatcaagtgggacatgatg
gaggatctctacaatgtcccgcgcgacgagggcctgtcgatgtgggttgcggatatggat
ttcgcagttccatcggtggtgaccgacaagatgcgcgagatggcagaccacggcgtctat
ggatacgtaaattgcgaccgcccctacaaatccgcgatctgctggtggatgcagaaccgc
cacggatggtcggtcgatccggaggcgattttcaccaccacaggcttggtgaacggcgtc
ggcatgtgcttggacacctacacacaaccgggcgacgggatcgttctcttcacgccagtc
tatcacgcttttgccaaggtcatccgcaacgccgggcgcgacgtggtggaatgtgaactc
gccgtcaatgatggacggtatgagatggatttcgcggcttatgacgcacagatgaccggc
accgagaaaatggtcatcctctgctcgccgcataatccggttggccgtgtctggaccgag
gaagagctgcgcggcgttgcggattttgccaagcggcacgatctgatcctgctgtcggac
gaaattcatcacgatctggtcttcgacggtgccacacatatcccgatgcagaacgcagcg
ccggacatcactgaccgcctgctcatgctgaccgcgccgtccaaaaccttcaactttgct
ggcatgcacaccggtcaggtcatcattccggatcccgatctgcgtgcgcaattctctcgc
cggatgctggcgctggccctctcgccgaattcccctggccaatgggcaacggcagcagcc
tattctcccgaaggcgccgcctgggtggatgagttggtgccctaccttgatggcaatcgc
cagctcttcgatgctgctgtgaatgagatcccgggtctacgctccacccgtctggaggcg
acctatctcgcttgggtcgatttctctggcaccggcatgagccgcgaggaatttacggcg
cgggtagaacagagcgccaagattgccgccaatcacggtccaagttttggcactggtggc
gacacattcctgcgcttcaacctcggcacgcaacgcgcgcgggtggaagaggcttgcgaa
cggctgcgcgacgcgttctccgacctgcaatag
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