Pseudomonas piscis: QL104_25915
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Entry
QL104_25915 CDS
T09652
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
ppii
Pseudomonas piscis
Pathway
ppii00300
Lysine biosynthesis
ppii00550
Peptidoglycan biosynthesis
ppii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppii00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
QL104_25915
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
QL104_25915
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ppii01011
]
QL104_25915
Enzymes [BR:
ppii01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
QL104_25915
Peptidoglycan biosynthesis and degradation proteins [BR:
ppii01011
]
Precursor biosynthesis
Amino acid ligase
QL104_25915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
WMN16753
UniProt:
A0ABY9NGA9
LinkDB
All DBs
Position
complement(5574308..5575771)
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AA seq
487 aa
AA seq
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MSLSLNKIFAHAGRDLLIRELTLDSRNVRAGDLFLAVPGARFDGREHIADALRRGAAAVA
YEVEGATVLPLTDVPLIPVKGLAAQLSDIAGRFYGEPSHQLNLVGVTGTNGKTSVTQLVA
QALDLLGQRCGLVGTLGTGFHGALQSGLHTTPNPIAVQAALADLKSAGAKAVAMEVSSHG
LDQGRVTALAFDVAVLTNLSRDHLDYHGTMQAYGEAKAKLFNWTDLRCRVINLDDDFGRK
LAAEAHESRLITYSQEDAGAYLYCREARFDDDGVRATLVTPQGEHHLRSSLLGRFNLSNL
LAAVGALLSLEYALDEILAVLPKLEGPAGRMQRLGGGRQPLVVVDYAHTPDALEKVLLAL
RPHAKGRLLCLFGCGGDRDRGKRPLMAEVVERLADGVLVTDDNPRTEDPAQIFADIRAGF
LNADQVEFIAGRGPAIARLIASASADDVVVLAGKGHEDYQEINGQRHAFSDLVEAGKALV
AWEVASA
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttagcctgaacaagatttttgcccacgccggtcgtgacttgctgatccgcgaa
ctgaccctggacagccgtaatgtacgtgccggtgatctgttcctggccgtgccgggcgcc
aggttcgacggtcgtgaacacatcgccgatgcgctgcggcgtggtgcggcggcagtggcc
tatgaagtggaaggcgccacagtgctgccgctgaccgacgttccgctgatcccggtcaag
ggtctggctgcgcaactgtcggacatcgccgggcgcttctatggcgagccgagtcatcaa
ctgaacctggtgggcgtgacaggcaccaatggcaagaccagcgtgacccagctagtggcc
caggccctggatctgcttggccagcgttgtggcctggtgggcaccttgggaaccggcttc
catggcgcgctgcaaagtggcctgcacaccacgccgaaccctatcgctgtccaggcggcc
ctggccgacttgaagagtgccggcgccaaggccgtggccatggaggtttcttcccatggc
ctggatcagggccgtgtaaccgccctggccttcgatgtcgcggtgctgaccaacctgtcc
cgtgaccatctggattatcacggaaccatgcaggcctacggcgaggccaaggccaaactg
ttcaactggaccgacctgcgttgccgggtaatcaacctcgacgacgattttggccgcaag
ctggcagccgaggcccacgagtcgcggctgattacctacagccaggaagatgccggcgcc
tatttgtattgccgcgaagctcgcttcgatgacgacggcgtgcgcgcgaccctggtgacg
ccgcaaggtgaacatcacctgcgcagcagcctgttggggcgcttcaacctgagcaacctg
ctggccgcagtgggcgccttgctgagcctggaatatgcgctggacgagattctcgcggtc
ctgcccaagctggaaggcccggccgggcgcatgcagcgcctgggcggcggtcgccagcca
ttggtcgtggtcgactacgcccataccccggatgccctggagaaagttttgctggccctg
cggccccatgccaaggggcgcctgctgtgcctgttcggttgtggtggtgatcgcgaccgc
ggcaagcggcccctgatggccgaggtggtcgagcgcctggccgatggcgtgctggtcacc
gacgacaacccgcgtactgaagaccctgcgcagattttcgccgatatccgcgccggcttc
ctgaacgcggaccaggtcgaattcatcgctggccgtggacctgccatcgcccgcctgatc
gcgtccgcctcggctgatgacgtggtggtactggccggcaaggggcatgaggattaccag
gaaatcaacggtcaacgccatgccttctccgatctcgtcgaggcgggcaaggccttggtg
gcgtgggaggtggccagtgcttaa
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