Pseudoalteromonas piscicida: B1L02_13510
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Entry
B1L02_13510 CDS
T04942
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
ppis
Pseudoalteromonas piscicida
Pathway
ppis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ppis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1L02_13510 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppis03400
]
B1L02_13510 (nth)
Enzymes [BR:
ppis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B1L02_13510 (nth)
DNA repair and recombination proteins [BR:
ppis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B1L02_13510 (nth)
Prokaryotic type
B1L02_13510 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ASD67926
UniProt:
A0AAD0RFH8
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All DBs
Position
1:2897337..2897999
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AA seq
220 aa
AA seq
DB search
MNKQKRIEILTRLRDENPHPETELEYSSPFELLVAVTLSAQATDVGVNKATRKLFPVANT
PEKILELGLEGLRDYIKTIGLFNSKANNVYKMCQILVDKHGSEVPENREALEALPGVGRK
TANVVLNCAFGWLKDNEGRYFLAVDTHIQRLANRTGYAKGKTVEQTEQDIIKKTPNKREF
MFNLHHWFILHGRYVCTARKPKCGSCIIEDLCEYKEKTED
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacaaaaacgtatagaaatactcacgcgactcagggacgaaaatccgcaccct
gaaactgagctagaatactcgtcaccattcgagcttttagttgccgttaccctctcagca
caagccaccgatgttggggtaaacaaagcgacacgcaaactattccctgttgccaacaca
ccagaaaagatccttgagcttggccttgagggcttaagagactatatcaaaaccattggt
ttgtttaattcaaaagctaataacgtctataaaatgtgtcagatcctcgtcgacaaacac
ggctccgaagttcctgaaaaccgtgaagcactagaggcgctgccaggtgtcggccgaaaa
accgcaaacgtagttttaaactgcgcttttggctggctaaaagataacgaaggtagatac
tttttagcagttgatactcatatccaacgccttgcaaaccgtactggttacgccaaaggc
aaaacggttgagcaaactgagcaagatatcattaagaagacccccaataagcgtgagttt
atgtttaacctgcaccactggttcattcttcatggccgttatgtatgtacagcgagaaaa
cccaaatgtggtagctgcattattgaagacctttgtgaatataaagaaaagacggaagat
taa
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