Pseudomonas plecoglossicida: RK21_00259
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Entry
RK21_00259 CDS
T03646
Name
(GenBank) hydrophobe/amphiphile efflux-1 (HAE1) family protein
KO
K18138
multidrug efflux pump
Organism
ppj
Pseudomonas plecoglossicida
Pathway
ppj01501
beta-Lactam resistance
ppj01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ppj00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RK21_00259
01503 Cationic antimicrobial peptide (CAMP) resistance
RK21_00259
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppj02000
]
RK21_00259
01504 Antimicrobial resistance genes [BR:
ppj01504
]
RK21_00259
Transporters [BR:
ppj02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RK21_00259
Antimicrobial resistance genes [BR:
ppj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
RK21_00259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
Motif
Other DBs
NCBI-ProteinID:
AJG11767
UniProt:
A0A099N5S9
LinkDB
All DBs
Position
complement(268174..271326)
Genome browser
AA seq
1050 aa
AA seq
DB search
MSKFFIDRPIFAWVIALVIMLVGALSILKLPINQYPSIAPPAIAIAVTYPGASAQTVQDT
VVQVIEQQLNGIDNLRYVSSESNSDGSMTITATFEQGTNPDTAQVQVQNKLNLATPLLPQ
EVQQQGIRVTKAVKNFLLVIGLVSEDGSMTKDDLANYIVSNMQDPISRTAGVGDFQVFGA
QYAMRIWLDPAKLNKFQLTPVDVKTAVAAQNVQVSSGQLGGLPAMPGTQLNATIIGKTRL
QTAEQFEKILLKVNSDGSQVRLGDVAQVGLGGENYAVSAQFNGKPASGLAVKLATGANAL
DTAKALRQTIADLEPFFPPGVKAVFPYDTTPVVTESISGVIHTLIEAVVLVFLVMYLFLQ
NFRATIITTMTVPVVLLGTFGILAAAGFSINTLTMFAMVLAIGLLVDDAIVVVENVERVM
SEEGLPPKEATKRSMEQIQGALVGIALVLSAVLLPMAFFGGSTGVIYRQFSITIVSAMGL
SVLVALIFTPALCATMLKPLKKGEHHVAKRGFFGWFNRNFDRSVTGYERSVGTILRNKVP
FLLAYALIVVGMIWLFARIPTAFLPEEDQGVLFAQVQTPAGSSAERTQVVVDQMREYLLS
EEADTVASVFTVNGFNFAGRGQSSGMAFIMLKPWDERSKENSVFALAQRAQQHFFTFRDA
MVFAFAPPAVLELGNATGFDVFLQDRGGVGHAKLMEARNQFLAKAAQSKILSAVRPNGLN
DEPQYQLTIDDERASALGVTIADINNTLSIALGASYVNDFIDRGRVKKVYIQGEPNARMS
PEDLQKWYVRNGAGEMVPFSSFAKGEWTYGSPKLSRYNGVEAMEILGAPAPGYSTGEAMA
EVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVV
LVVPLGIIGALIATSMRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKELHEQGRSLYDA
AIEACRMRLRPIIMTSLAFILGVVPLTIASGAGAGSQHAIGTGVIGGMISATVLAIFWVP
LFFVAVSSLFGSKEPEKDVTPETPRYEAGQ
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagttctttatcgatcgcccgatcttcgcctgggtgatcgccttggtgatcatg
ctggtcggcgccttgtcgatcctgaagctgccgatcaaccagtaccccagcatcgcgccg
ccggccatcgccatcgccgtgacctacccgggcgcctcggcgcaaaccgtgcaggacacc
gtggtacaggtgatcgagcagcagctcaacggtatcgacaacctgcgttatgtgtcgtcg
gaaagtaactccgacggcagcatgaccattaccgccaccttcgagcagggcaccaaccca
gacaccgcacaggtgcaggtgcagaacaagctgaacctggccaccccgctgctgccgcag
gaagtgcagcagcaaggtatccgcgtcaccaaggcagtgaagaacttcctgctggtgatc
ggcctggtgtccgaagacggcagcatgaccaaggacgacctggccaactacatcgtctcc
aacatgcaggacccgatctcgcgtaccgcgggtgtgggtgacttccaggtgttcggtgcg
cagtacgccatgcgtatctggctcgatccggccaagctgaacaagttccagctgaccccg
gtcgacgtcaagaccgccgtggccgcgcagaacgtgcaggtatcctccggccagctcggt
ggcctgccggccatgccgggtacccagctgaacgccaccatcatcggcaagacccgcctg
cagactgccgagcagttcgagaagatcctgctcaaggtcaacagcgacggttcgcaggtg
cgtctgggtgatgtcgcccaggttggcctgggtggtgaaaactatgccgtcagcgcccag
ttcaacggcaagccggcctccggcctggcagttaaactggctaccggtgccaacgccctg
gacaccgccaaggccctgcgccagaccatcgccgacctggaaccgttcttcccgcctggg
gtgaaagcggtattcccgtatgacaccaccccggtggtcaccgaatcgatcagtggcgtt
atccacaccctgatcgaagccgtggtcctggtgttcctggtgatgtacctgttcctgcag
aacttccgcgccaccatcatcaccaccatgaccgtaccggttgtgttgctgggtaccttc
ggcatccttgccgctgccggcttcagcatcaacaccctgaccatgttcgccatggtcctg
gccatcggcttgctggtggacgacgccatcgtcgtggtggagaacgtcgagcgggtgatg
tccgaggaaggcttgccgcccaaggaagcgaccaagcgctcgatggagcagatccagggt
gccctggtgggtatcgccctggtgctgtcggcagtactgctgcccatggcgttcttcggc
ggctccacgggtgtgatctatcggcagttctccatcaccatcgtctcggccatgggcctg
tcggtgctggtggcgctcatcttcaccccggccctgtgcgccaccatgctcaagccgctg
aagaagggcgagcaccatgtggccaagcgtggcttctttggctggttcaaccgcaacttc
gaccgcagcgtaaccggctacgagcgcagcgtgggcaccatcctgcgcaacaaggtaccg
ttcctgctggcctacgcgctgatcgtggtcggcatgatctggctgttcgcccgcatccct
accgcgttcctgccggaagaagaccagggcgtattgtttgcccaggtacagaccccggcc
ggctccagtgccgagcgcacccaagtggtggtcgaccagatgcgtgagtacctgctcagc
gaagaggccgacaccgtggcttcggttttcaccgtcaacggcttcaacttcgccggccgt
ggccagagctcgggtatggcattcatcatgctcaagccgtgggatgaacgctccaaggaa
aacagcgtgttcgcccttgcccagcgtgcccagcagcacttcttcaccttccgcgatgcg
atggtgttcgcctttgccccgcctgcggtgctcgaactgggtaacgccaccggcttcgac
gtgttcctgcaggaccgcggcggtgtcggccatgccaagctgatggaagcgcgcaaccag
ttcctggccaaggccgcgcagagcaagatcctcagcgccgtgcgcccgaacggcctgaac
gacgagccgcagtaccagctgaccattgatgacgagcgtgccagcgccctgggcgtgacc
atcgctgacatcaacaacaccctgtcgattgccttgggtgccagctacgtcaacgacttc
atcgaccgtggccgggtcaagaaggtgtacatccagggcgagccgaacgcgcggatgagc
ccggaagacctgcagaagtggtacgtgcgcaatggcgccggcgaaatggtgccgttctcc
tccttcgccaagggcgaatggacctacggttcgccgaagctgtcgcgttacaacggcgtc
gaggcaatggaaatcctcggtgctccggccccgggctacagtaccggtgaagccatggcc
gaggtcgagcgcattgctggcgaattgccaagcggcatcggcttctcctggaccggcatg
tcctacgaggaaaaactctccggttcgcagatgccggcactgttcgccctctcggtactg
ttcgtgttcctgtgcctggcagccctgtacgaaagctggtcgatcccgatcgccgtggta
ctggtagtaccgctgggtatcatcggtgccctgatcgccaccagcatgcgcgggttgtcc
aacgacgtatacttcctggtcggcctgttgaccaccatcggcctggcggcgaaaaacgcc
attctgatcgtcgagttcgccaaggaactgcacgaacaaggccgcagcctgtacgacgcg
gcgatcgaggcgtgccgcatgcgtctgcgcccgatcatcatgacctcgctggcgttcatc
ctcggcgtggtaccgttgactatcgccagcggcgccggcgccggcagccagcacgccatc
ggtactggtgtgatcggcggcatgatcagtgcgaccgtgctggctatcttctgggtacca
ctgttcttcgtcgcagtgtcgtcactgttcggcagcaaagagccggaaaaagacgtcacc
cctgaaactccacgttatgaggctgggcaatga
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integrated database retrieval system
